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Gwenaël Samain
cython
Commits
b5009ce5
Commit
b5009ce5
authored
Feb 15, 2012
by
Mark Florisson
Browse files
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Browse Files
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Plain Diff
Compare memoryview type pointers directly when coercing from memoryview to memoryview slice
parent
721f6ecd
Changes
6
Show whitespace changes
Inline
Side-by-side
Showing
6 changed files
with
190 additions
and
41 deletions
+190
-41
Cython/Compiler/Buffer.py
Cython/Compiler/Buffer.py
+6
-3
Cython/Compiler/MemoryView.py
Cython/Compiler/MemoryView.py
+2
-1
Cython/Utility/Buffer.c
Cython/Utility/Buffer.c
+57
-0
Cython/Utility/MemoryView.pyx
Cython/Utility/MemoryView.pyx
+16
-3
Cython/Utility/MemoryView_C.c
Cython/Utility/MemoryView_C.c
+53
-34
tests/run/memoryview_compare_type_pointers.srctree
tests/run/memoryview_compare_type_pointers.srctree
+56
-0
No files found.
Cython/Compiler/Buffer.py
View file @
b5009ce5
...
...
@@ -784,11 +784,14 @@ impl = """
"""
)
raise_buffer_fallback_code
=
load_buffer_utility
(
"BufferFallbackError"
)
buffer_structs_code
=
load_buffer_utility
(
"BufferFormatStructs"
)
buffer_structs_code
=
load_buffer_utility
(
"BufferFormatStructs"
,
proto_block
=
'utility_code_proto_before_types'
)
acquire_utility_code
=
load_buffer_utility
(
"BufferFormatCheck"
,
context
=
context
,
requires
=
[
buffer_structs_code
])
# See utility code BufferFormatFromTypeInfo
_typeinfo_to_format_code
=
load_buffer_utility
(
"TypeInfoToFormat"
,
context
=
{},
requires
=
[
buffer_structs_code
])
_typeinfo_to_format_code
=
load_buffer_utility
(
"TypeInfoToFormat"
,
context
=
{},
requires
=
[
buffer_structs_code
])
typeinfo_compare_code
=
load_buffer_utility
(
"TypeInfoCompare"
,
context
=
{},
requires
=
[
buffer_structs_code
])
\ No newline at end of file
Cython/Compiler/MemoryView.py
View file @
b5009ce5
...
...
@@ -897,7 +897,8 @@ memviewslice_init_code = load_memview_c_utility(
context
=
dict
(
context
,
BUF_MAX_NDIMS
=
Options
.
buffer_max_dims
),
requires
=
[
memviewslice_declare_code
,
Buffer
.
acquire_utility_code
,
atomic_utility
],
atomic_utility
,
Buffer
.
typeinfo_compare_code
],
)
memviewslice_index_helpers
=
load_memview_c_utility
(
"MemviewSliceIndex"
)
...
...
Cython/Utility/Buffer.c
View file @
b5009ce5
...
...
@@ -710,6 +710,63 @@ static CYTHON_INLINE void __Pyx_SafeReleaseBuffer(Py_buffer* info) {
__Pyx_ReleaseBuffer
(
info
);
}
/////////////// TypeInfoCompare.proto ///////////////
static
int
__pyx_typeinfo_cmp
(
__Pyx_TypeInfo
*
a
,
__Pyx_TypeInfo
*
b
);
/////////////// TypeInfoCompare ///////////////
/* See if two dtypes are equal */
static
int
__pyx_typeinfo_cmp
(
__Pyx_TypeInfo
*
a
,
__Pyx_TypeInfo
*
b
)
{
int
i
;
if
(
!
a
||
!
b
)
return
0
;
if
(
a
==
b
)
return
1
;
if
(
a
->
size
!=
b
->
size
||
a
->
typegroup
!=
b
->
typegroup
||
a
->
is_unsigned
!=
b
->
is_unsigned
||
a
->
ndim
!=
b
->
ndim
)
return
0
;
if
(
a
->
ndim
)
{
/* Verify multidimensional C arrays */
for
(
i
=
0
;
i
<
a
->
ndim
;
i
++
)
if
(
a
->
arraysize
[
i
]
!=
b
->
arraysize
[
i
])
return
0
;
}
if
(
a
->
typegroup
==
'S'
)
{
/* Check for packed struct */
if
(
a
->
flags
!=
b
->
flags
)
return
0
;
/* compare all struct fields */
if
(
a
->
fields
||
b
->
fields
)
{
/* Check if both have fields */
if
(
!
(
a
->
fields
&&
b
->
fields
))
return
0
;
/* compare */
for
(
i
=
0
;
a
->
fields
[
i
].
type
&&
b
->
fields
[
i
].
type
;
i
++
)
{
__Pyx_StructField
*
field_a
=
a
->
fields
+
i
;
__Pyx_StructField
*
field_b
=
b
->
fields
+
i
;
if
(
field_a
->
offset
!=
field_b
->
offset
||
!
__pyx_typeinfo_cmp
(
field_a
->
type
,
field_b
->
type
))
return
0
;
}
/* If all fields are processed, we have a match */
return
!
a
->
fields
[
i
].
type
&&
!
b
->
fields
[
i
].
type
;
}
}
return
1
;
}
/////////////// TypeInfoToFormat.proto ///////////////
struct
__pyx_typeinfo_string
{
...
...
Cython/Utility/MemoryView.pyx
View file @
b5009ce5
...
...
@@ -32,6 +32,7 @@ cdef extern from *:
cdef
struct
__pyx_memoryview
"__pyx_memoryview_obj"
:
Py_buffer
view
PyObject
*
obj
__Pyx_TypeInfo
*
typeinfo
ctypedef
struct
{{
memviewslice_name
}}:
__pyx_memoryview
*
memview
...
...
@@ -58,6 +59,10 @@ cdef extern from *:
PyBUF_INDIRECT
PyBUF_RECORDS
ctypedef
struct
__Pyx_TypeInfo
:
pass
cdef
extern
from
*
:
ctypedef
int
__pyx_atomic_int
{{
memviewslice_name
}}
slice_copy_contig
"__pyx_memoryview_copy_new_contig"
(
...
...
@@ -307,6 +312,7 @@ cdef class memoryview(object):
cdef
Py_buffer
view
cdef
int
flags
cdef
bint
dtype_is_object
cdef
__Pyx_TypeInfo
*
typeinfo
def
__cinit__
(
memoryview
self
,
object
obj
,
int
flags
,
bint
dtype_is_object
=
False
):
self
.
obj
=
obj
...
...
@@ -328,7 +334,7 @@ cdef class memoryview(object):
self
.
acquisition_count_aligned_p
=
<
__pyx_atomic_int
*>
align_pointer
(
<
void
*>
&
self
.
acquisition_count
[
0
],
sizeof
(
__pyx_atomic_int
))
self
.
typeinfo
=
NULL
def
__dealloc__
(
memoryview
self
):
if
self
.
obj
is
not
None
:
...
...
@@ -601,8 +607,14 @@ cdef class memoryview(object):
@
cname
(
'__pyx_memoryview_new'
)
cdef
memoryview_cwrapper
(
object
o
,
int
flags
,
bint
dtype_is_object
):
return
memoryview
(
o
,
flags
,
dtype_is_object
)
cdef
memoryview_cwrapper
(
object
o
,
int
flags
,
bint
dtype_is_object
,
__Pyx_TypeInfo
*
typeinfo
):
cdef
memoryview
result
=
memoryview
(
o
,
flags
,
dtype_is_object
)
result
.
typeinfo
=
typeinfo
return
result
@
cname
(
'__pyx_memoryview_check'
)
cdef
bint
memoryview_check
(
object
o
):
return
isinstance
(
o
,
memoryview
)
cdef
tuple
_unellipsify
(
object
index
,
int
ndim
):
"""
...
...
@@ -956,6 +968,7 @@ cdef memoryview_fromslice({{memviewslice_name}} *memviewslice,
__PYX_INC_MEMVIEW
(
memviewslice
,
1
)
result
.
from_object
=
<
object
>
memviewslice
.
memview
.
obj
result
.
typeinfo
=
memviewslice
.
memview
.
typeinfo
result
.
view
=
memviewslice
.
memview
.
view
result
.
view
.
buf
=
<
void
*>
memviewslice
.
data
...
...
Cython/Utility/MemoryView_C.c
View file @
b5009ce5
...
...
@@ -89,14 +89,21 @@ static CYTHON_INLINE {{memviewslice_name}} {{funcname}}(PyObject *);
#define __Pyx_IS_C_CONTIG 1
#define __Pyx_IS_F_CONTIG 2
static
int
__Pyx_ValidateAndInit_memviewslice
(
struct
__pyx_memoryview_obj
*
memview
,
int
*
axes_specs
,
int
c_or_f_flag
,
int
ndim
,
__Pyx_TypeInfo
*
dtype
,
__Pyx_BufFmt_StackElem
stack
[],
__Pyx_memviewslice
*
memviewslice
);
static
int
__Pyx_ValidateAndInit_memviewslice
(
int
*
axes_specs
,
int
c_or_f_flag
,
int
buf_flags
,
int
ndim
,
__Pyx_TypeInfo
*
dtype
,
__Pyx_BufFmt_StackElem
stack
[],
__Pyx_memviewslice
*
memviewslice
,
PyObject
*
original_obj
);
static
int
__Pyx_init_memviewslice
(
struct
__pyx_memoryview_obj
*
memview
,
int
ndim
,
__Pyx_memviewslice
*
memviewslice
);
__Pyx_memviewslice
*
memviewslice
,
int
memview_is_new_reference
);
static
CYTHON_INLINE
int
__pyx_add_acquisition_count_locked
(
__pyx_atomic_int
*
acquisition_count
,
PyThread_type_lock
lock
);
...
...
@@ -116,7 +123,6 @@ static CYTHON_INLINE char *__pyx_memviewslice_index_full(const char *bufp, Py_ss
static
CYTHON_INLINE
{{
memviewslice_name
}}
{{
funcname
}}(
PyObject
*
obj
)
{
{{
memviewslice_name
}}
result
=
{{
memslice_init
}};
struct
__pyx_memoryview_obj
*
memview
;
__Pyx_BufFmt_StackElem
stack
[{{
struct_nesting_depth
}}];
int
axes_specs
[]
=
{
{{
axes_specs
}}
};
int
retcode
;
...
...
@@ -127,19 +133,16 @@ static CYTHON_INLINE {{memviewslice_name}} {{funcname}}(PyObject *obj) {
return
result
;
}
memview
=
(
struct
__pyx_memoryview_obj
*
)
__pyx_memoryview_new
(
obj
,
{{
buf_flag
}},
0
);
if
(
unlikely
(
!
memview
))
goto
__pyx_fail
;
retcode
=
__Pyx_ValidateAndInit_memviewslice
(
memview
,
axes_specs
,
{{
c_or_f_flag
}},
{{
ndim
}},
&
{{
dtype_typeinfo
}},
stack
,
&
result
);
retcode
=
__Pyx_ValidateAndInit_memviewslice
(
axes_specs
,
{{
c_or_f_flag
}},
{{
buf_flag
}},
{{
ndim
}},
&
{{
dtype_typeinfo
}},
stack
,
&
result
,
obj
);
if
(
unlikely
(
retcode
==
-
1
))
goto
__pyx_fail
;
return
result
;
__pyx_fail:
Py_XDECREF
(
memview
);
result
.
memview
=
NULL
;
result
.
data
=
NULL
;
return
result
;
...
...
@@ -148,29 +151,38 @@ __pyx_fail:
////////// MemviewSliceInit //////////
static
int
__Pyx_ValidateAndInit_memviewslice
(
struct
__pyx_memoryview_obj
*
memview
,
int
*
axes_specs
,
int
c_or_f_flag
,
int
buf_flags
,
int
ndim
,
__Pyx_TypeInfo
*
dtype
,
__Pyx_BufFmt_StackElem
stack
[],
__Pyx_memviewslice
*
memviewslice
)
{
__Pyx_memviewslice
*
memviewslice
,
PyObject
*
original_obj
)
{
struct
__pyx_memoryview_obj
*
memview
,
*
new_memview
;
__Pyx_RefNannyDeclarations
Py_buffer
*
buf
=
&
memview
->
view
;
Py_buffer
*
buf
;
int
stride
,
i
,
spec
=
0
,
retval
=
-
1
;
__Pyx_BufFmt_Context
ctx
;
int
from_memoryview
=
__pyx_memoryview_check
(
original_obj
);
__Pyx_RefNannySetupContext
(
"ValidateAndInit_memviewslice"
);
if
(
!
buf
)
goto
fail
;
if
(
memviewslice
->
data
||
memviewslice
->
memview
)
{
PyErr_SetString
(
PyExc_ValueError
,
"memoryviewslice struct must be initialized to NULL."
);
if
(
from_memoryview
&&
__pyx_typeinfo_cmp
(
dtype
,
((
struct
__pyx_memoryview_obj
*
)
original_obj
)
->
typeinfo
))
{
/* We have a matching dtype, skip format parsing */
memview
=
(
struct
__pyx_memoryview_obj
*
)
original_obj
;
new_memview
=
NULL
;
}
else
{
memview
=
(
struct
__pyx_memoryview_obj
*
)
__pyx_memoryview_new
(
original_obj
,
buf_flags
,
0
,
dtype
);
new_memview
=
memview
;
if
(
unlikely
(
!
memview
))
goto
fail
;
}
buf
=
&
memview
->
view
;
if
(
buf
->
ndim
!=
ndim
)
{
PyErr_Format
(
PyExc_ValueError
,
"Buffer has wrong number of dimensions (expected %d, got %d)"
,
...
...
@@ -178,8 +190,10 @@ static int __Pyx_ValidateAndInit_memviewslice(
goto
fail
;
}
if
(
new_memview
)
{
__Pyx_BufFmt_Init
(
&
ctx
,
stack
,
dtype
);
if
(
!
__Pyx_BufFmt_CheckString
(
&
ctx
,
buf
->
format
))
goto
fail
;
}
if
((
unsigned
)
buf
->
itemsize
!=
dtype
->
size
)
{
PyErr_Format
(
PyExc_ValueError
,
...
...
@@ -267,16 +281,16 @@ static int __Pyx_ValidateAndInit_memviewslice(
}
}
if
(
unlikely
(
__Pyx_init_memviewslice
(
memview
,
ndim
,
memviewslice
)
==
-
1
))
{
if
(
unlikely
(
__Pyx_init_memviewslice
(
memview
,
ndim
,
memviewslice
,
new_memview
!=
NULL
)
==
-
1
))
{
goto
fail
;
}
retval
=
0
;
goto
no_fail
;
fail:
__Pyx_XDECREF
(
memviewslice
->
memview
);
memviewslice
->
memview
=
0
;
memviewslice
->
data
=
0
;
Py_XDECREF
(
new_memview
);
retval
=
-
1
;
no_fail:
...
...
@@ -287,14 +301,15 @@ no_fail:
static
int
__Pyx_init_memviewslice
(
struct
__pyx_memoryview_obj
*
memview
,
int
ndim
,
{{
memviewslice_name
}}
*
memviewslice
)
{{
memviewslice_name
}}
*
memviewslice
,
int
memview_is_new_reference
)
{
__Pyx_RefNannyDeclarations
int
i
,
retval
=-
1
;
Py_buffer
*
buf
=
&
memview
->
view
;
__Pyx_RefNannySetupContext
(
"init_memviewslice"
);
if
(
!
buf
)
{
if
(
!
buf
)
{
PyErr_SetString
(
PyExc_ValueError
,
"buf is NULL."
);
goto
fail
;
...
...
@@ -316,12 +331,15 @@ __Pyx_init_memviewslice(struct __pyx_memoryview_obj *memview,
memviewslice
->
memview
=
memview
;
memviewslice
->
data
=
(
char
*
)
buf
->
buf
;
__pyx_add_acquisition_count
(
memview
);
if
(
__pyx_add_acquisition_count
(
memview
)
==
0
&&
!
memview_is_new_reference
)
{
Py_INCREF
(
memview
);
}
retval
=
0
;
goto
no_fail
;
fail:
__Pyx_XDECREF
(
memviewslice
->
memview
);
/* Don't decref, the memoryview may be borrowed. Let the caller do the cleanup */
/* __Pyx_XDECREF(memviewslice->memview); */
memviewslice
->
memview
=
0
;
memviewslice
->
data
=
0
;
retval
=
-
1
;
...
...
@@ -486,12 +504,13 @@ __pyx_memoryview_copy_new_contig(const __Pyx_memviewslice *from_mvs,
memview_obj
=
(
struct
__pyx_memoryview_obj
*
)
__pyx_memoryview_new
(
(
PyObject
*
)
array_obj
,
contig_flag
,
dtype_is_object
);
dtype_is_object
,
from_mvs
->
memview
->
typeinfo
);
if
(
unlikely
(
!
memview_obj
))
goto
fail
;
/* initialize new_mvs */
if
(
unlikely
(
__Pyx_init_memviewslice
(
memview_obj
,
ndim
,
&
new_mvs
)
<
0
))
if
(
unlikely
(
__Pyx_init_memviewslice
(
memview_obj
,
ndim
,
&
new_mvs
,
1
)
<
0
))
goto
fail
;
if
(
unlikely
(
__pyx_memoryview_copy_contents
(
*
from_mvs
,
new_mvs
,
ndim
,
ndim
,
...
...
tests/run/memoryview_compare_type_pointers.srctree
0 → 100644
View file @
b5009ce5
PYTHON setup.py build_ext --inplace
PYTHON -c "import test_compare_type_pointers"
######## setup.py ########
from Cython.Build import cythonize
from distutils.core import setup
setup(
ext_modules = cythonize("*.pyx"),
)
######## test_compare_type_pointers.pyx ########
include "types.pxi"
import other_module
def test_foo_view(Foo[:] m):
return m[0].f
assert test_foo_view(other_module.fooview_obj) == 5.0
def test_double_view(double[:] m):
return m[0]
assert test_double_view(other_module.doubleview_obj) == 6.0
######## other_module.pyx ########
include "types.pxi"
cdef Foo[10] fooarray
cdef Foo[:] fooview = fooarray
fooview_obj = fooview
fooview[0].f = 5.0
cdef double[10] doublearray
cdef double[:] doubleview = doublearray
doubleview_obj = doubleview
doubleview[0] = 6.0
######## types.pxi ########
ctypedef packed struct Baz:
double d
ctypedef struct Bar:
int i
ctypedef struct Foo:
float f
double complex dc
char c
int i
Bar b
char s[20]
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