Fix 2FA authentication spoofing
Signed-off-by: Rémy Coutable <remy@rymai.me>

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Signed-off-by: Rémy Coutable <remy@rymai.me>

Closes #13957

Bump Git version requirement to 2.7.4 (for 8.4)

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See merge request !3283

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Fix missing gitlab_git version bump

Closes #13430 

See merge request !2811

Closes #13430

Bump gitlab_git to ~> 7.2.24

bump gitlab_git to ~> 7.2.24 (closes: #13245)

See merge request !2772

Add notice about variables in build log

Related to: https://dev.gitlab.org/gitlab/gitlabhq/merge_requests/1942

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See merge request !2761

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Fix timeout issue for rake task gitlab:backup:create

This is a fix for a database timeout which can occur when the backup
create task is taking very long (1-2 hours).
It seems that ActiveRecord is loosing the connection after a hour
idleness and need to be reconnected before use.

See merge request !2757

Limit guest access builds

This is https://dev.gitlab.org/gitlab/gitlabhq/merge_requests/1942 for ce-stable

See merge request !1943

This solves https://dev.gitlab.org/gitlab/gitlabhq/issues/2646

1. This MR simplifies CI permission model:
    - read_build: allows to read a list of builds, artifacts and trace
    - update_build: allows to cancel and retry builds
    - admin_build: allows to manage triggers, runners and variables
    - read_commit_status: allows to read a list of commit statuses (including the status of a build, but doesn't allow to see a build details)
    - create_commit_status: allows to create a new commit status using API

2. I do make sure that the proper permissions are used in all places where the CI can be shown.

3. Add the `read_build` ability if user is anonymous or guest and allow_guest_to_access_builds is enabled.

4. Add CI setting: public_builds.

5. The artifacts specific permission are removed, since they are covered by `*_build`.

Updated omniuath-saml to the latest version.

See merge request !2684

Allow manual resize of js-autosize textareas

First, the autosize library was being too controlling and removed the
`resize` property from any elements to which it was attached, removing
the drag handle. We've disabled this behavior in the vendored library
and added a spec to prevent a regression during an upgrade.

Second, we detect (as best we can) when the user manually resizes an
autosize textarea, and then remove the autosize behavior from it and
increase its max-height.

This should allow for the best of both worlds.

Closes #12832

See merge request !2653

Expand Git instrumentation

This instruments some extra `Gitlab::Git` code as well as a collection of `Rugged` constants.

See merge request !2664

Increase LFS objects size column

Fixes #12745

Increases the `size` column integer limit to an 8-byte integer. This allows for a max value of `9223372036854775807` which is 9,223,372,036 GB. That should do it 😃

I tested this by first reproducing the error (push a file larger than 2.1 GB). The error was:

```
RangeError (3145728000 is out of range for ActiveRecord::ConnectionAdapters::PostgreSQL::OID::Integer with limit 4):
  lib/gitlab/lfs/response.rb:232:in `store_file'
  lib/gitlab/lfs/response.rb:170:in `render_lfs_upload_ok'
  lib/gitlab/lfs/response.rb:51:in `block in render_storage_upload_store_response'
  lib/gitlab/lfs/response.rb:204:in `render_response_to_push'
  lib/gitlab/lfs/response.rb:50:in `render_storage_upload_store_response'
  lib/gitlab/lfs/router.rb:76:in `put_response'
  lib/gitlab/lfs/router.rb:20:in `try_call'
  lib/gitlab/backend/grack_auth.rb:41:in `call'
  lib/gitlab/backend/grack_auth.rb:18:in `call_with_kerberos_support'
  lib/gitlab/backend/grack_auth.rb:8:in `call'
```

Then I ran this migration and pushed the file again. It uploaded successfully.

See merge request !2644

Backport LDAP user assignment changes from EE

See https://gitlab.com/gitlab-org/gitlab-ee/merge_requests/146

See merge request !2641

Update sentry-raven gem.

Should resolve `fatal: Not a git repository (or any of the parent directories): .git` warnings.

Fixes #12657

See merge request !2636

Correctly determine MR diff base when MR has merge conflicts

Fixes https://gitlab.com/gitlab-org/gitlab-ce/issues/12779

See merge request !2632

Fix highlighting in blame view.

See merge request !2630

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Fix CI runner version not being properly updated when asked for a build

Due to broken implementation of attribute_for_keys the runner information was not updated correctly.

This MR adds test to check that such scenario will never happen again.

See merge request !2618

Use generic method to checks if artifacts are available

Closes #12626

See merge request !2576

Increase contrast between highlighted code comments and inline diff marker.

Fixes https://gitlab.com/gitlab-org/gitlab-ce/issues/12737.

It was especially bad in Monokai, better now.

See merge request !2629

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Bug/jschatz1/file browser lines

Fixes #12725 

![Screen_Shot_2016-01-26_at_11.19.39_AM](/uploads/c5f5a143926600e02de4cfc0687ed8dd/Screen_Shot_2016-01-26_at_11.19.39_AM.png)


See merge request !2615

Instrument Gitlab::Git::Repository



See merge request !2528

Update gitlab_git & use new method for counting branches

Corresponding gitlab_git merge request detailing some of the rationale behind this: https://gitlab.com/gitlab-org/gitlab_git/merge_requests/62

Fixes #12418

See merge request !2535