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nexedi
re6stnet
Commits
f6113c52
Commit
f6113c52
authored
Jul 13, 2012
by
Ulysse Beaugnon
Browse files
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Plain Diff
You can now mesure the connectivity of a graph.
It is still very slow, I will try to improve performance
parent
b4c5fdd0
Changes
4
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Showing
4 changed files
with
219 additions
and
23 deletions
+219
-23
simulation/graph.cpp
simulation/graph.cpp
+161
-3
simulation/main.cpp
simulation/main.cpp
+23
-18
simulation/main.h
simulation/main.h
+34
-2
simulation/results.cpp
simulation/results.cpp
+1
-0
No files found.
simulation/graph.cpp
View file @
f6113c52
#include "main.h"
#include <cmath>
#include <map>
Graph
::
Graph
(
int
size
,
int
k
,
int
maxPeers
,
mt19937
rng
)
:
Graph
::
Graph
(
int
size
,
int
k
,
int
maxPeers
,
mt19937
&
rng
)
:
distrib
(
uniform_int_distribution
<
int
>
(
0
,
size
-
1
)),
size
(
size
)
size
(
size
)
,
generator
(
rng
)
{
adjacency
=
new
vector
<
int
>
[
size
];
for
(
int
i
=
0
;
i
<
size
;
i
++
)
{
set
<
int
>
alreadyConnected
;
unordered_
set
<
int
>
alreadyConnected
;
alreadyConnected
.
insert
(
i
);
for
(
int
j
=
0
;
j
<
k
;
j
++
)
...
...
@@ -63,3 +65,159 @@ void Graph::KillMachines(float proportion)
}
}
}
int
Graph
::
GetMinCut
()
{
int
nIter
=
log
(
size
)
*
log
(
size
);
int
minCut
=
-
1
;
for
(
int
i
=
0
;
i
<
nIter
;
i
++
)
{
MinCutGraph
graph
=
MinCutGraph
(
adjacency
,
size
);
int
minCutCandidate
=
GetMinCut
(
graph
);
if
(
minCut
==
-
1
||
minCut
>
minCutCandidate
)
minCut
=
minCutCandidate
;
}
return
minCut
;
}
int
Graph
::
GetMinCut
(
MinCutGraph
&
copy1
)
{
int
n
=
copy1
.
nodes
.
size
();
if
(
n
==
2
)
return
copy1
.
edges
.
size
();
MinCutGraph
copy2
(
copy1
);
int
nMerge
=
min
(
n
-
2.0
,
n
/
1.414
);
copy1
.
Merge
(
nMerge
,
generator
);
copy2
.
Merge
(
nMerge
,
generator
);
return
min
(
GetMinCut
(
copy1
),
GetMinCut
(
copy2
));
}
MinCutGraph
::
MinCutGraph
(
vector
<
int
>*
adjacency
,
int
n
)
{
nodes
.
resize
(
n
);
int
nextEdgeId
=
0
;
for
(
int
i
=
0
;
i
<
n
;
i
++
)
for
(
int
j
:
adjacency
[
i
])
if
(
j
>
i
)
{
nodes
[
i
].
v
.
insert
(
nextEdgeId
);
nodes
[
j
].
v
.
insert
(
nextEdgeId
);
edges
.
push_back
(
nullable
<
pair
<
int
,
int
>>
(
pair
<
int
,
int
>
(
i
,
j
)));
nextEdgeId
++
;
}
}
void
MinCutGraph
::
Merge
(
int
nMerge
,
mt19937
&
rng
)
{
uniform_int_distribution
<
int
>
distrib
(
0
,
edges
.
size
()
-
1
);
while
(
nMerge
>
0
)
{
// Choose an edge
int
eId
=
distrib
(
rng
);
if
(
edges
[
eId
].
null
)
continue
;
int
n1
=
edges
[
eId
].
v
.
first
;
int
n2
=
edges
[
eId
].
v
.
second
;
// anilate n2
nodes
[
n2
].
null
=
true
;
// redirect all edges from n2
for
(
int
i
:
nodes
[
n2
].
v
)
{
if
(
edges
[
i
].
v
.
first
==
n1
||
edges
[
i
].
v
.
second
==
n1
)
{
nodes
[
n1
].
v
.
erase
(
i
);
edges
[
i
].
null
=
true
;
}
else
{
nodes
[
n1
].
v
.
insert
(
i
);
if
(
edges
[
i
].
v
.
first
==
n2
)
edges
[
i
].
v
.
first
=
n1
;
else
edges
[
i
].
v
.
second
=
n1
;
}
}
nMerge
--
;
}
RenumNodes
();
RenumEdges
();
}
void
MinCutGraph
::
Check
()
{
cout
<<
"CHECKING ... "
;
cout
.
flush
();
for
(
int
i
=
0
;
i
<
edges
.
size
();
i
++
)
{
if
(
!
edges
[
i
].
null
)
{
auto
e
=
edges
[
i
].
v
;
if
(
e
.
first
>=
nodes
.
size
())
cout
<<
"Bad first"
<<
endl
;
cout
.
flush
();
if
(
e
.
second
>=
nodes
.
size
())
cout
<<
"Bad second"
<<
endl
;
cout
.
flush
();
if
(
nodes
[
e
.
first
].
v
.
count
(
i
)
==
0
)
cout
<<
"Bad first node"
<<
endl
;
cout
.
flush
();
if
(
nodes
[
e
.
second
].
v
.
count
(
i
)
==
0
)
cout
<<
"Bad second node"
<<
endl
;
cout
.
flush
();
}
}
for
(
int
i
=
0
;
i
<
nodes
.
size
();
i
++
)
if
(
!
nodes
[
i
].
null
)
for
(
int
e
:
nodes
[
i
].
v
)
if
(
edges
[
e
].
v
.
first
!=
i
&&
edges
[
e
].
v
.
second
!=
i
)
cout
<<
"Bad edge"
<<
endl
;
cout
.
flush
();
cout
<<
"DONE"
<<
endl
;
cout
.
flush
();
}
void
MinCutGraph
::
RenumEdges
()
{
int
nextId
=
0
;
for
(
int
i
=
0
;
i
<
edges
.
size
();
i
++
)
if
(
!
edges
[
i
].
null
)
{
edges
[
nextId
]
=
edges
[
i
];
nodes
[
edges
[
nextId
].
v
.
first
].
v
.
erase
(
i
);
nodes
[
edges
[
nextId
].
v
.
first
].
v
.
insert
(
nextId
);
nodes
[
edges
[
nextId
].
v
.
second
].
v
.
erase
(
i
);
nodes
[
edges
[
nextId
].
v
.
second
].
v
.
insert
(
nextId
);
nextId
++
;
}
edges
.
resize
(
nextId
);
}
void
MinCutGraph
::
RenumNodes
()
{
int
nextId
=
0
;
for
(
int
i
=
0
;
i
<
nodes
.
size
();
i
++
)
if
(
!
nodes
[
i
].
null
)
{
nodes
[
nextId
]
=
nodes
[
i
];
for
(
int
j
:
nodes
[
nextId
].
v
)
{
if
(
edges
[
j
].
v
.
first
==
i
)
edges
[
j
].
v
.
first
=
nextId
;
else
edges
[
j
].
v
.
second
=
nextId
;
}
nextId
++
;
}
nodes
.
resize
(
nextId
);
}
simulation/main.cpp
View file @
f6113c52
...
...
@@ -5,23 +5,27 @@
const
char
*
outName
=
"out.csv"
;
Results
Simulate
(
mt19937
rng
,
int
n
,
int
k
,
int
maxPeer
,
int
maxDistanceFrom
,
float
alivePercent
,
int
runs
)
Results
Simulate
(
int
seed
,
int
n
,
int
k
,
int
maxPeer
,
int
maxDistanceFrom
,
float
alivePercent
,
int
runs
)
{
Results
results
(
maxPeer
,
20
);
mt19937
rng
(
seed
);
for
(
int
r
=
0
;
r
<
runs
;
r
++
)
{
Graph
graph
(
n
,
k
,
maxPeer
,
rng
);
graph
.
KillMachines
(
alivePercent
);
int
minCut
=
graph
.
GetMinCut
();
if
(
results
.
minKConnexity
==
-
1
||
results
.
minKConnexity
>
minCut
)
results
.
minKConnexity
=
minCut
;
results
.
UpdateArity
(
graph
);
// Compute the shortest path
for
(
int
i
=
0
;
i
<
min
(
graph
.
size
,
maxDistanceFrom
);
i
++
)
/*
for(int i=0; i<min(graph.size, maxDistanceFrom); i++)
{
int distance[graph.size];
graph.GetDistancesFrom(i, distance);
results.UpdateDistance(distance, graph.size);
}
}
*/
}
results
.
Finalise
();
...
...
@@ -34,20 +38,21 @@ int main(int argc, char** argv)
FILE
*
output
=
fopen
(
outName
,
"wt"
);
int
fno
=
fileno
(
output
);
fprintf
(
output
,
"n,k,
maxPeer,avgDistance,disconnected,disconnectionProba,maxDistance,maxArityDistrib
\n
"
);
fprintf
(
output
,
"n,k,
a,maxPeer,avgDistance,disconnected,disconnectionProba,maxDistance,maxArityDistrib,minCut
\n
"
);
vector
<
future
<
string
>>
outputStrings
;
for
(
int
n
=
200
;
n
<=
20
000
;
n
*=
2
)
for
(
int
n
=
200
0
;
n
<=
2
000
;
n
*=
2
)
for
(
int
k
=
10
;
k
<=
10
;
k
+=
5
)
for
(
float
a
=
0.05
;
a
<
1
;
a
+=
0.05
)
for
(
float
a
=
1
;
a
<=
1
;
a
+=
0.05
)
{
outputStrings
.
push_back
(
async
(
launch
::
async
,
[
rng
,
n
,
k
,
a
]()
int
seed
=
rng
();
outputStrings
.
push_back
(
async
(
launch
::
async
,
[
seed
,
n
,
k
,
a
]()
{
Results
results
=
Simulate
(
rng
,
n
,
k
,
3
*
k
,
10000
,
a
,
100
);
Results
results
=
Simulate
(
seed
,
n
,
k
,
3
*
k
,
10000
,
a
,
1
);
ostringstream
out
;
out
<<
n
<<
","
<<
k
<<
","
<<
3
*
k
<<
","
<<
results
.
avgDistance
<<
","
out
<<
n
<<
","
<<
k
<<
","
<<
a
<<
","
<<
3
*
k
<<
","
<<
results
.
avgDistance
<<
","
<<
results
.
disconnected
<<
","
<<
results
.
disconnectionProba
<<
","
<<
results
.
maxDistanceReached
<<
","
<<
results
.
arityDistrib
[
3
*
k
]
<<
results
.
maxDistanceReached
<<
","
<<
results
.
arityDistrib
[
3
*
k
]
<<
","
<<
results
.
minKConnexity
<<
endl
;
return
out
.
str
();
}));
...
...
simulation/main.h
View file @
f6113c52
...
...
@@ -3,22 +3,52 @@
#include <random>
#include <queue>
#include <set>
#include <unordered_set>
using
namespace
std
;
template
<
class
T
>
struct
nullable
{
T
v
;
bool
null
;
nullable
()
:
null
(
false
)
{
};
nullable
(
T
t
)
:
v
(
t
),
null
(
false
)
{
};
};
class
MinCutGraph
{
public:
vector
<
nullable
<
pair
<
int
,
int
>>>
edges
;
vector
<
nullable
<
unordered_set
<
int
>>>
nodes
;
MinCutGraph
(
vector
<
int
>*
adjacency
,
int
n
);
void
Merge
(
int
nMerge
,
mt19937
&
rng
);
private:
void
Check
();
void
RenumEdges
();
void
RenumNodes
();
};
class
Graph
{
public:
Graph
(
int
size
,
int
k
,
int
maxPeers
,
mt19937
rng
);
Graph
(
int
size
,
int
k
,
int
maxPeers
,
mt19937
&
rng
);
~
Graph
()
{
delete
[]
adjacency
;
};
void
GetDistancesFrom
(
int
node
,
int
*
distance
);
void
KillMachines
(
float
proportion
);
int
GetMinCut
();
//void SplitAS(float proportionAS1, float proportionAS2);
vector
<
int
>*
adjacency
;
int
size
;
private:
int
GetMinCut
(
MinCutGraph
&
graph
);
uniform_int_distribution
<
int
>
distrib
;
mt19937
&
generator
;
};
class
Results
...
...
@@ -35,6 +65,7 @@ public:
double
*
distanceDistrib
;
double
avgDistance
;
int
maxDistanceReached
;
int
minKConnexity
;
double
disconnectionProba
;
double
arityTooBig
;
...
...
@@ -47,6 +78,7 @@ public:
private:
void
AddAritySample
(
int
arity
);
void
AddDistanceSample
(
int
distance
);
int64_t
nAritySample
;
int64_t
nDistanceSample
;
};
simulation/results.cpp
View file @
f6113c52
...
...
@@ -17,6 +17,7 @@ Results::Results(int maxArity, int maxDistance) :
distanceTooBig
=
0
;
disconnected
=
0
;
avgDistance
=
0
;
minKConnexity
=
-
1
;
maxDistanceReached
=
-
1
;
}
...
...
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