Commit eb35deda authored by Jérome Perrin's avatar Jérome Perrin

testing: assorted fixes for software upgrade tests

See also slapos!875

See merge request !271
parents 2c50a97d c8e16881
# -*- coding: utf-8 -*-
##############################################################################
#
# Copyright (c) 2018 Vifib SARL and Contributors. All Rights Reserved.
#
# WARNING: This program as such is intended to be used by professional
# programmers who take the whole responsibility of assessing all potential
# consequences resulting from its eventual inadequacies and bugs
# End users who are looking for a ready-to-use solution with commercial
# guarantees and support are strongly adviced to contract a Free Software
# Service Company
#
# This program is Free Software; you can redistribute it and/or
# modify it under the terms of the GNU General Public License
# as published by the Free Software Foundation; either version 3
# of the License, or (at your option) any later version.
#
# This program is distributed in the hope that it will be useful,
# but WITHOUT ANY WARRANTY; without even the implied warranty of
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
# GNU General Public License for more details.
#
# You should have received a copy of the GNU General Public License
# along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place - Suite 330, Boston, MA 02111-1307, USA.
#
##############################################################################
import fnmatch
import glob
import os
import re
import warnings
import pkg_resources
import requests
try:
import subprocess32 as subprocess
except ImportError:
import subprocess # type: ignore
subprocess # pyflakes
try:
from typing import Dict, Iterable, List
except ImportError:
pass
from ..slap.standalone import StandaloneSlapOS
from ..grid.utils import md5digest
def checkSoftware(slap, software_url):
# type: (StandaloneSlapOS, str) -> None
"""Check software installation.
This perform a few basic static checks for common problems
with software installations.
"""
# Check that all components set rpath correctly and we don't have miss linking any libraries.
# Also check that they are not linked against system libraries, except a white list of core
# system libraries.
system_lib_white_list = set((
'libc',
'libcrypt',
'libdl',
'libgcc_s',
'libgomp',
'libm',
'libnsl',
'libpthread',
'libresolv',
'librt',
'libstdc++',
'libutil',
))
# we also ignore a few patterns for part that are known to be binary distributions,
# for which we generate LD_LIBRARY_PATH wrappers or we don't use directly.
ignored_file_patterns = set((
'*/parts/java-re*/*',
'*/parts/firefox*/*',
'*/parts/chromium-*/*',
'*/parts/chromedriver*/*',
'*/parts/libreoffice-bin/*',
'*/parts/wkhtmltopdf/*',
# R uses wrappers to relocate symbols
'*/r-language/lib*/R/*',
# pulp is a git checkout with some executables
'*/pulp-repository.git/src/pulp/solverdir/cbc*',
# nss is not a binary distribution, but for some reason it has invalid rpath, but it does
# not seem to be a problem in our use cases.
'*/parts/nss/*',
# npm packages containing binaries
'*/node_modules/phantomjs*/*',
'*/grafana/tools/phantomjs/*',
'*/node_modules/puppeteer/*',
# left over of compilation failures
'*/*__compile__/*',
))
software_hash = md5digest(software_url)
error_list = []
warning_list = []
ldd_so_resolved_re = re.compile(
r'\t(?P<library_name>.*) => (?P<library_path>.*) \(0x')
ldd_already_loaded_re = re.compile(r'\t(?P<library_name>.*) \(0x')
ldd_not_found_re = re.compile(r'.*not found.*')
class DynamicLibraryNotFound(Exception):
"""Exception raised when ldd cannot resolve a library.
"""
def getLddOutput(path):
# type: (str) -> Dict[str, str]
"""Parse ldd output on shared object/executable as `path` and returns a mapping
of library paths or None when library is not found, keyed by library so name.
Raises a `DynamicLibraryNotFound` if any dynamic library is not found.
Special entries, like VDSO ( linux-vdso.so.1 ) or ELF interpreter
( /lib64/ld-linux-x86-64.so.2 ) are ignored.
"""
libraries = {} # type: Dict[str, str]
try:
ldd_output = subprocess.check_output(
('ldd', path),
stderr=subprocess.STDOUT,
universal_newlines=True,
)
except subprocess.CalledProcessError as e:
if e.output not in ('\tnot a dynamic executable\n',):
raise
return libraries
if ldd_output == '\tstatically linked\n':
return libraries
not_found = []
for line in ldd_output.splitlines():
resolved_so_match = ldd_so_resolved_re.match(line)
ldd_already_loaded_match = ldd_already_loaded_re.match(line)
not_found_match = ldd_not_found_re.match(line)
if resolved_so_match:
libraries[resolved_so_match.group(
'library_name')] = resolved_so_match.group('library_path')
elif ldd_already_loaded_match:
# VDSO or ELF, ignore . See https://stackoverflow.com/a/35805410/7294664 for more about this
pass
elif not_found_match:
not_found.append(line)
else:
raise RuntimeError('Unknown ldd line %s for %s.' % (line, path))
if not_found:
not_found_text = '\n'.join(not_found)
raise DynamicLibraryNotFound(
'{path} has some not found libraries:\n{not_found_text}'.format(
**locals()))
return libraries
def checkExecutableLink(paths_to_check, valid_paths_for_libs):
# type: (Iterable[str], Iterable[str]) -> List[str]
"""Check shared libraries linked with executables in `paths_to_check`.
Only libraries from `valid_paths_for_libs` are accepted.
Returns a list of error messages.
"""
valid_paths_for_libs = [os.path.realpath(x) for x in valid_paths_for_libs]
executable_link_error_list = []
for path in paths_to_check:
for root, dirs, files in os.walk(path):
for f in files:
f = os.path.join(root, f)
if any(fnmatch.fnmatch(f, ignored_pattern)
for ignored_pattern in ignored_file_patterns):
continue
if os.access(f, os.X_OK) or fnmatch.fnmatch('*.so', f):
try:
libs = getLddOutput(f)
except DynamicLibraryNotFound as e:
executable_link_error_list.append(str(e))
else:
for lib, lib_path in libs.items():
if lib.split('.')[0] in system_lib_white_list:
continue
lib_path = os.path.realpath(lib_path)
# dynamically linked programs can only be linked with libraries
# present in software or in shared parts repository.
if any(lib_path.startswith(valid_path)
for valid_path in valid_paths_for_libs):
continue
executable_link_error_list.append(
'{f} uses system library {lib_path} for {lib}'.format(
**locals()))
return executable_link_error_list
paths_to_check = (
os.path.join(slap.software_directory, software_hash),
slap.shared_directory,
)
error_list.extend(
checkExecutableLink(
paths_to_check,
paths_to_check + tuple(slap._shared_part_list),
))
# check this software is not referenced in any shared parts.
for signature_file in glob.glob(os.path.join(slap.shared_directory, '*', '*',
'.*slapos.*.signature')):
with open(signature_file) as f:
signature_content = f.read()
if software_hash in signature_content:
error_list.append(
"Software hash present in signature {}\n{}\n".format(
signature_file, signature_content))
def checkEggsVersionsKnownVulnerabilities(
egg_directories,
safety_db=requests.get(
'https://raw.githubusercontent.com/pyupio/safety-db/master/data/insecure_full.json'
).json()):
# type: (List[str], Dict) -> Iterable[str]
"""Check eggs against known vulnerabilities database from https://github.com/pyupio/safety-db
"""
env = pkg_resources.Environment(egg_directories)
for egg in env:
known_vulnerabilities = safety_db.get(egg)
if known_vulnerabilities:
for distribution in env[egg]:
for known_vulnerability in known_vulnerabilities:
for vulnerable_spec in known_vulnerability['specs']:
for req in pkg_resources.parse_requirements(egg +
vulnerable_spec):
vulnerability_description = "\n".join(
u"{}: {}".format(*item)
for item in known_vulnerability.items())
if distribution in req:
yield (
u"{egg} use vulnerable version {distribution.version} because {vulnerable_spec}.\n"
"{vulnerability_description}\n".format(**locals()))
warning_list.extend(
checkEggsVersionsKnownVulnerabilities(
glob.glob(
os.path.join(
slap.software_directory,
software_hash,
'eggs',
'*',
)) + glob.glob(
os.path.join(
slap.software_directory,
software_hash,
'develop-eggs',
'*',
))))
if warning_list:
warnings.warn('\n'.join(warning_list))
if error_list:
raise RuntimeError('\n'.join(error_list))
This diff is collapsed.
...@@ -218,10 +218,16 @@ class CrontabMixin(object): ...@@ -218,10 +218,16 @@ class CrontabMixin(object):
be a relative time. be a relative time.
""" """
crontab_command = self._getCrontabCommand(crontab_name) crontab_command = self._getCrontabCommand(crontab_name)
try:
crontab_output = subprocess.check_output( crontab_output = subprocess.check_output(
"faketime {date} bash -o pipefail -e -c '{crontab_command}'".format(**locals()), "faketime {date} bash -o pipefail -e -c '{crontab_command}'".format(**locals()),
shell=True, shell=True,
stderr=subprocess.STDOUT,
) )
except subprocess.CalledProcessError as e:
self.logger.debug('error executing crontab %s output: %s', crontab_command, e.output)
raise
else:
self.logger.debug("crontab %s output: %s", crontab_command, crontab_output) self.logger.debug("crontab %s output: %s", crontab_command, crontab_output)
......
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