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Gwenaël Samain
cython
Commits
54cbd0e8
Commit
54cbd0e8
authored
Aug 23, 2011
by
Mark Florisson
Browse files
Options
Browse Files
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Plain Diff
Fix segfault & fix test
parent
349dd60e
Changes
4
Hide whitespace changes
Inline
Side-by-side
Showing
4 changed files
with
52 additions
and
41 deletions
+52
-41
Cython/Utility/MemoryView.pyx
Cython/Utility/MemoryView.pyx
+14
-5
tests/errors/e_cython_parallel_pyobject_reduction.pyx
tests/errors/e_cython_parallel_pyobject_reduction.pyx
+0
-16
tests/run/memoryview.pyx
tests/run/memoryview.pyx
+18
-10
tests/run/memslice.pyx
tests/run/memslice.pyx
+20
-10
No files found.
Cython/Utility/MemoryView.pyx
View file @
54cbd0e8
...
@@ -158,7 +158,7 @@ cdef array array_cwrapper(tuple shape, Py_ssize_t itemsize, char *format, char *
...
@@ -158,7 +158,7 @@ cdef array array_cwrapper(tuple shape, Py_ssize_t itemsize, char *format, char *
return
result
return
result
##########
View.MemoryView
##########
##########
########## View.MemoryView ##########
##########
import
cython
import
cython
...
@@ -180,6 +180,7 @@ cdef extern from *:
...
@@ -180,6 +180,7 @@ cdef extern from *:
void
Py_INCREF
(
object
)
void
Py_INCREF
(
object
)
void
Py_DECREF
(
object
)
void
Py_DECREF
(
object
)
void
Py_XINCREF
(
object
)
ctypedef
struct
PyObject
ctypedef
struct
PyObject
...
@@ -197,6 +198,10 @@ cdef extern from *:
...
@@ -197,6 +198,10 @@ cdef extern from *:
void
__PYX_INC_MEMVIEW
({{
memviewslice_name
}}
*
memslice
,
int
have_gil
)
void
__PYX_INC_MEMVIEW
({{
memviewslice_name
}}
*
memslice
,
int
have_gil
)
void
__PYX_XDEC_MEMVIEW
({{
memviewslice_name
}}
*
memslice
,
int
have_gil
)
void
__PYX_XDEC_MEMVIEW
({{
memviewslice_name
}}
*
memslice
,
int
have_gil
)
ctypedef
struct
__pyx_buffer
"Py_buffer"
:
PyObject
*
obj
PyObject
*
Py_None
@
cname
(
'__pyx_MemviewEnum'
)
@
cname
(
'__pyx_MemviewEnum'
)
cdef
class
Enum
(
object
):
cdef
class
Enum
(
object
):
...
@@ -246,6 +251,9 @@ cdef class memoryview(object):
...
@@ -246,6 +251,9 @@ cdef class memoryview(object):
if
type
(
self
)
is
memoryview
or
obj
is
not
None
:
if
type
(
self
)
is
memoryview
or
obj
is
not
None
:
__Pyx_GetBuffer
(
obj
,
&
self
.
view
,
flags
)
__Pyx_GetBuffer
(
obj
,
&
self
.
view
,
flags
)
if
<
PyObject
*>
self
.
view
.
obj
==
NULL
:
(
<
__pyx_buffer
*>
&
self
.
view
).
obj
=
Py_None
Py_INCREF
(
None
)
self
.
lock
=
PyThread_allocate_lock
()
self
.
lock
=
PyThread_allocate_lock
()
if
self
.
lock
==
NULL
:
if
self
.
lock
==
NULL
:
...
@@ -320,6 +328,8 @@ cdef class memoryview(object):
...
@@ -320,6 +328,8 @@ cdef class memoryview(object):
itemp
[
i
]
=
c
itemp
[
i
]
=
c
def
__getbuffer__
(
self
,
Py_buffer
*
info
,
int
flags
):
def
__getbuffer__
(
self
,
Py_buffer
*
info
,
int
flags
):
# Note: self.view.obj must not be NULL
Py_INCREF
(
self
.
view
.
obj
)
info
[
0
]
=
self
.
view
info
[
0
]
=
self
.
view
info
.
obj
=
self
info
.
obj
=
self
...
@@ -333,10 +343,6 @@ cdef class memoryview(object):
...
@@ -333,10 +343,6 @@ cdef class memoryview(object):
property
object
:
property
object
:
@
cname
(
'__pyx_memoryview__get__object'
)
@
cname
(
'__pyx_memoryview__get__object'
)
def
__get__
(
self
):
def
__get__
(
self
):
if
(
self
.
obj
is
None
and
<
PyObject
*>
self
.
view
.
obj
!=
NULL
and
self
.
view
.
obj
is
not
None
):
return
<
object
>
self
.
view
.
obj
return
self
.
obj
return
self
.
obj
property
shape
:
property
shape
:
...
@@ -459,6 +465,7 @@ cdef memoryview memview_slice(memoryview memview, object indices):
...
@@ -459,6 +465,7 @@ cdef memoryview memview_slice(memoryview memview, object indices):
cdef
extern
from
"stdlib.h"
:
cdef
extern
from
"stdlib.h"
:
void
abort
()
nogil
void
abort
()
nogil
void
printf
(
char
*
s
,
...)
nogil
cdef
extern
from
"stdio.h"
:
cdef
extern
from
"stdio.h"
:
ctypedef
struct
FILE
ctypedef
struct
FILE
...
@@ -715,6 +722,8 @@ cdef memoryview_fromslice({{memviewslice_name}} *memviewslice,
...
@@ -715,6 +722,8 @@ cdef memoryview_fromslice({{memviewslice_name}} *memviewslice,
result
.
view
=
memviewslice
.
memview
.
view
result
.
view
=
memviewslice
.
memview
.
view
result
.
view
.
buf
=
<
void
*>
memviewslice
.
data
result
.
view
.
buf
=
<
void
*>
memviewslice
.
data
result
.
view
.
ndim
=
ndim
result
.
view
.
ndim
=
ndim
(
<
__pyx_buffer
*>
&
result
.
view
).
obj
=
Py_None
Py_INCREF
(
None
)
result
.
view
.
shape
=
<
Py_ssize_t
*>
result
.
from_slice
.
shape
result
.
view
.
shape
=
<
Py_ssize_t
*>
result
.
from_slice
.
shape
result
.
view
.
strides
=
<
Py_ssize_t
*>
result
.
from_slice
.
strides
result
.
view
.
strides
=
<
Py_ssize_t
*>
result
.
from_slice
.
strides
...
...
tests/errors/e_cython_parallel_pyobject_reduction.pyx
deleted
100644 → 0
View file @
349dd60e
# mode: error
from
cython.parallel
cimport
prange
def
invalid_closure_reduction
():
sum
=
0
def
inner
():
nonlocal
sum
cdef
int
i
for
i
in
prange
(
10
,
nogil
=
True
):
with
gil
:
sum
+=
i
_ERRORS
=
u"""
e_cython_parallel_pyobject_reduction.pyx:10:23: Python objects cannot be reductions
"""
tests/run/memoryview.pyx
View file @
54cbd0e8
...
@@ -588,13 +588,16 @@ def assign_temporary_to_object(object[:] mslice):
...
@@ -588,13 +588,16 @@ def assign_temporary_to_object(object[:] mslice):
buf
=
mslice
buf
=
mslice
buf
[
1
]
=
{
3
-
2
:
2
+
(
2
*
4
)
-
2
}
buf
[
1
]
=
{
3
-
2
:
2
+
(
2
*
4
)
-
2
}
def
print_
int_offsets
(
*
args
):
def
print_
offsets
(
*
args
,
size
=
0
,
newline
=
True
):
for
item
in
args
:
for
item
in
args
:
print
item
/
size
of
(
int
)
,
print
item
/
size
,
print
if
newline
:
print
def
test_generic_slicing
(
arg
):
def
print_int_offsets
(
*
args
,
newline
=
True
):
print_offsets
(
*
args
,
size
=
sizeof
(
int
),
newline
=
newline
)
def
test_generic_slicing
(
arg
,
indirect
=
False
):
"""
"""
Test simple slicing
Test simple slicing
>>> test_generic_slicing(IntMockBuffer("A", range(8 * 14 * 11), shape=(8, 14, 11)))
>>> test_generic_slicing(IntMockBuffer("A", range(8 * 14 * 11), shape=(8, 14, 11)))
...
@@ -614,7 +617,7 @@ def test_generic_slicing(arg):
...
@@ -614,7 +617,7 @@ def test_generic_slicing(arg):
Test indirect slicing
Test indirect slicing
>>> L = [[range(k * 12 + j * 4, k * 12 + j * 4 + 4) for j in xrange(3)] for k in xrange(5)]
>>> L = [[range(k * 12 + j * 4, k * 12 + j * 4 + 4) for j in xrange(3)] for k in xrange(5)]
>>> test_generic_slicing(IntMockBuffer("A", L, shape=(5, 3, 4)))
>>> test_generic_slicing(IntMockBuffer("A", L, shape=(5, 3, 4))
, indirect=True
)
acquired A
acquired A
(2, 0, 2)
(2, 0, 2)
0 1 -1
0 1 -1
...
@@ -623,10 +626,10 @@ def test_generic_slicing(arg):
...
@@ -623,10 +626,10 @@ def test_generic_slicing(arg):
>>> stride1 = 21 * 14
>>> stride1 = 21 * 14
>>> stride2 = 21
>>> stride2 = 21
>>> L = [[range(k * stride1 + j * stride2, k * stride1 + j * stride2 + 21) for j in xrange(14)] for k in xrange(9)]
>>> L = [[range(k * stride1 + j * stride2, k * stride1 + j * stride2 + 21) for j in xrange(14)] for k in xrange(9)]
>>> test_generic_slicing(IntMockBuffer("A", L, shape=(9, 14, 21)))
>>> test_generic_slicing(IntMockBuffer("A", L, shape=(9, 14, 21))
, indirect=True
)
acquired A
acquired A
(3, 9, 2)
(3, 9, 2)
2
0 1 -1
1
0 1 -1
released A
released A
"""
"""
...
@@ -635,9 +638,14 @@ def test_generic_slicing(arg):
...
@@ -635,9 +638,14 @@ def test_generic_slicing(arg):
b
=
a
[
2
:
8
:
2
,
-
4
:
1
:
-
1
,
1
:
3
]
b
=
a
[
2
:
8
:
2
,
-
4
:
1
:
-
1
,
1
:
3
]
print
b
.
shape
print
b
.
shape
if
b
.
suboffsets
[
0
]
<
0
:
print_int_offsets
(
*
b
.
strides
)
if
indirect
:
print_int_offsets
(
*
b
.
suboffsets
)
print
b
.
suboffsets
[
0
]
/
sizeof
(
int
*
),
print
b
.
suboffsets
[
1
]
/
sizeof
(
int
),
print
b
.
suboffsets
[
2
]
else
:
print_int_offsets
(
b
.
strides
[
0
],
b
.
strides
[
1
],
b
.
strides
[
2
])
print_int_offsets
(
b
.
suboffsets
[
0
],
b
.
suboffsets
[
1
],
b
.
suboffsets
[
2
])
cdef
int
i
,
j
,
k
cdef
int
i
,
j
,
k
for
i
in
range
(
b
.
shape
[
0
]):
for
i
in
range
(
b
.
shape
[
0
]):
...
...
tests/run/memslice.pyx
View file @
54cbd0e8
...
@@ -1162,14 +1162,17 @@ def test_cdef_function2():
...
@@ -1162,14 +1162,17 @@ def test_cdef_function2():
cdef
_function2
(
global_A
,
global_B
)
cdef
_function2
(
global_A
,
global_B
)
def
print_
int_offsets
(
*
args
):
def
print_
offsets
(
*
args
,
size
=
0
,
newline
=
True
):
for
item
in
args
:
for
item
in
args
:
print
item
/
size
of
(
int
)
,
print
item
/
size
,
print
if
newline
:
print
def
print_int_offsets
(
*
args
,
newline
=
True
):
print_offsets
(
*
args
,
size
=
sizeof
(
int
),
newline
=
newline
)
@
testcase
@
testcase
def
test_generic_slicing
(
arg
):
def
test_generic_slicing
(
arg
,
indirect
=
False
):
"""
"""
Test simple slicing
Test simple slicing
>>> test_generic_slicing(IntMockBuffer("A", range(8 * 14 * 11), shape=(8, 14, 11)))
>>> test_generic_slicing(IntMockBuffer("A", range(8 * 14 * 11), shape=(8, 14, 11)))
...
@@ -1189,7 +1192,7 @@ def test_generic_slicing(arg):
...
@@ -1189,7 +1192,7 @@ def test_generic_slicing(arg):
Test indirect slicing
Test indirect slicing
>>> L = [[range(k * 12 + j * 4, k * 12 + j * 4 + 4) for j in xrange(3)] for k in xrange(5)]
>>> L = [[range(k * 12 + j * 4, k * 12 + j * 4 + 4) for j in xrange(3)] for k in xrange(5)]
>>> test_generic_slicing(IntMockBuffer("A", L, shape=(5, 3, 4)))
>>> test_generic_slicing(IntMockBuffer("A", L, shape=(5, 3, 4))
, indirect=True
)
acquired A
acquired A
2 0 2
2 0 2
0 1 -1
0 1 -1
...
@@ -1198,10 +1201,10 @@ def test_generic_slicing(arg):
...
@@ -1198,10 +1201,10 @@ def test_generic_slicing(arg):
>>> stride1 = 21 * 14
>>> stride1 = 21 * 14
>>> stride2 = 21
>>> stride2 = 21
>>> L = [[range(k * stride1 + j * stride2, k * stride1 + j * stride2 + 21) for j in xrange(14)] for k in xrange(9)]
>>> L = [[range(k * stride1 + j * stride2, k * stride1 + j * stride2 + 21) for j in xrange(14)] for k in xrange(9)]
>>> test_generic_slicing(IntMockBuffer("A", L, shape=(9, 14, 21)))
>>> test_generic_slicing(IntMockBuffer("A", L, shape=(9, 14, 21))
, indirect=True
)
acquired A
acquired A
3 9 2
3 9 2
2
0 1 -1
1
0 1 -1
released A
released A
"""
"""
...
@@ -1209,9 +1212,14 @@ def test_generic_slicing(arg):
...
@@ -1209,9 +1212,14 @@ def test_generic_slicing(arg):
cdef
int
[::
view
.
generic
,
::
view
.
generic
,
:]
b
=
a
[
2
:
8
:
2
,
-
4
:
1
:
-
1
,
1
:
3
]
cdef
int
[::
view
.
generic
,
::
view
.
generic
,
:]
b
=
a
[
2
:
8
:
2
,
-
4
:
1
:
-
1
,
1
:
3
]
print
b
.
shape
[
0
],
b
.
shape
[
1
],
b
.
shape
[
2
]
print
b
.
shape
[
0
],
b
.
shape
[
1
],
b
.
shape
[
2
]
if
b
.
suboffsets
[
0
]
<
0
:
if
indirect
:
print
b
.
suboffsets
[
0
]
/
sizeof
(
int
*
),
print
b
.
suboffsets
[
1
]
/
sizeof
(
int
),
print
b
.
suboffsets
[
2
]
else
:
print_int_offsets
(
b
.
strides
[
0
],
b
.
strides
[
1
],
b
.
strides
[
2
])
print_int_offsets
(
b
.
strides
[
0
],
b
.
strides
[
1
],
b
.
strides
[
2
])
print_int_offsets
(
b
.
suboffsets
[
0
],
b
.
suboffsets
[
1
],
b
.
suboffsets
[
2
])
print_int_offsets
(
b
.
suboffsets
[
0
],
b
.
suboffsets
[
1
],
b
.
suboffsets
[
2
])
cdef
int
i
,
j
,
k
cdef
int
i
,
j
,
k
for
i
in
range
(
b
.
shape
[
0
]):
for
i
in
range
(
b
.
shape
[
0
]):
...
@@ -1250,7 +1258,9 @@ def test_indirect_slicing(arg):
...
@@ -1250,7 +1258,9 @@ def test_indirect_slicing(arg):
cdef
int
[::
view
.
indirect
,
::
view
.
indirect
]
c
=
b
[...,
0
]
cdef
int
[::
view
.
indirect
,
::
view
.
indirect
]
c
=
b
[...,
0
]
print
b
.
shape
[
0
],
b
.
shape
[
1
],
b
.
shape
[
2
]
print
b
.
shape
[
0
],
b
.
shape
[
1
],
b
.
shape
[
2
]
print_int_offsets
(
b
.
suboffsets
[
0
],
b
.
suboffsets
[
1
],
b
.
suboffsets
[
2
])
print
b
.
suboffsets
[
0
]
/
sizeof
(
int
*
),
print
b
.
suboffsets
[
1
]
/
sizeof
(
int
),
print
b
.
suboffsets
[
2
]
print
b
[
4
,
2
,
1
]
print
b
[
4
,
2
,
1
]
print
c
[
4
,
2
]
print
c
[
4
,
2
]
...
...
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