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Gwenaël Samain
cython
Commits
acfbf762
Commit
acfbf762
authored
May 02, 2011
by
Mark Florisson
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Add openmp tag to test runner
parent
88db4139
Changes
3
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3 changed files
with
66 additions
and
178 deletions
+66
-178
runtests.py
runtests.py
+63
-1
tests/run/numpy_parallel.pyx
tests/run/numpy_parallel.pyx
+1
-2
tests/run/parallel.pyx
tests/run/parallel.pyx
+2
-175
No files found.
runtests.py
View file @
acfbf762
...
@@ -54,6 +54,7 @@ CY3_DIR = None
...
@@ -54,6 +54,7 @@ CY3_DIR = None
from
distutils.dist
import
Distribution
from
distutils.dist
import
Distribution
from
distutils.core
import
Extension
from
distutils.core
import
Extension
from
distutils.command.build_ext
import
build_ext
as
_build_ext
from
distutils.command.build_ext
import
build_ext
as
_build_ext
from
distutils
import
sysconfig
distutils_distro
=
Distribution
()
distutils_distro
=
Distribution
()
if
sys
.
platform
==
'win32'
:
if
sys
.
platform
==
'win32'
:
...
@@ -78,8 +79,60 @@ def update_numpy_extension(ext):
...
@@ -78,8 +79,60 @@ def update_numpy_extension(ext):
import
numpy
import
numpy
ext
.
include_dirs
.
append
(
numpy
.
get_include
())
ext
.
include_dirs
.
append
(
numpy
.
get_include
())
def
update_openmp_extension
(
ext
):
language
=
ext
.
language
if
language
==
'cpp'
:
flags
=
OPENMP_CPP_COMPILER_FLAGS
else
:
flags
=
OPENMP_C_COMPILER_FLAGS
if
flags
:
compile_flags
,
link_flags
=
flags
ext
.
extra_compile_args
.
extend
(
compile_flags
.
split
())
ext
.
extra_link_args
.
extend
(
link_flags
.
split
())
return
ext
return
EXCLUDE_EXT
def
get_openmp_compiler_flags
(
language
):
"""
As of gcc 4.2, it supports OpenMP 2.5. Gcc 4.4 implements 3.0. We don't
(currently) check for other compilers.
returns a two-tuple of (CFLAGS, LDFLAGS) to build the OpenMP extension
"""
if
language
==
'cpp'
:
cc
=
sysconfig
.
get_config_var
(
'CXX'
)
else
:
cc
=
sysconfig
.
get_config_var
(
'CC'
)
matcher
=
re
.
compile
(
r"gcc version (\
d+
\.\
d+)
").search
try:
import subprocess
except ImportError:
in_, out, err = os.popen(cc = "
-
v
")
output = out.read() or err.read()
else:
p = subprocess.Popen([cc, "
-
v
"], stdout=subprocess.PIPE,
stderr=subprocess.STDOUT)
output = p.stdout.read()
compiler_version = matcher(output).group(1)
if compiler_version and compiler_version.split('.') >= ['4', '2']:
return '-fopenmp', '-fopenmp'
OPENMP_C_COMPILER_FLAGS = get_openmp_compiler_flags('c')
OPENMP_CPP_COMPILER_FLAGS = get_openmp_compiler_flags('cpp')
# Return this from the EXT_EXTRAS matcher callback to exclude the extension
EXCLUDE_EXT = object()
EXT_EXTRAS = {
EXT_EXTRAS = {
'tag:numpy' : update_numpy_extension,
'tag:numpy' : update_numpy_extension,
'tag:openmp': update_openmp_extension,
}
}
# TODO: use tags
# TODO: use tags
...
@@ -519,13 +572,21 @@ class CythonCompileTestCase(unittest.TestCase):
...
@@ -519,13 +572,21 @@ class CythonCompileTestCase(unittest.TestCase):
extra_compile_args = ext_compile_flags,
extra_compile_args = ext_compile_flags,
**extra_extension_args
**extra_extension_args
)
)
if self.language == 'cpp':
# Set the language now as the fixer might need it
extension.language = 'c++'
for matcher, fixer in EXT_EXTRAS.items():
for matcher, fixer in EXT_EXTRAS.items():
if isinstance(matcher, str):
if isinstance(matcher, str):
del EXT_EXTRAS[matcher]
del EXT_EXTRAS[matcher]
matcher = string_selector(matcher)
matcher = string_selector(matcher)
EXT_EXTRAS[matcher] = fixer
EXT_EXTRAS[matcher] = fixer
if matcher(module, tags):
if matcher(module, tags):
extension
=
fixer
(
extension
)
or
extension
newext = fixer(extension)
if newext is EXCLUDE_EXT:
return
extension = newext or extension
if self.language == 'cpp':
if self.language == 'cpp':
extension.language = 'c++'
extension.language = 'c++'
build_extension.extensions = [extension]
build_extension.extensions = [extension]
...
@@ -646,6 +707,7 @@ def run_forked_test(result, run_func, test_name, fork=True):
...
@@ -646,6 +707,7 @@ def run_forked_test(result, run_func, test_name, fork=True):
try:
try:
cid, result_code = os.waitpid(child_id, 0)
cid, result_code = os.waitpid(child_id, 0)
module_name = test_name.split()[-1]
# os.waitpid returns the child's result code in the
# os.waitpid returns the child's result code in the
# upper byte of result_code, and the signal it was
# upper byte of result_code, and the signal it was
# killed by in the lower byte
# killed by in the lower byte
...
...
tests/run/numpy_parallel.pyx
View file @
acfbf762
# tag: numpy
# tag: numpy
# distutils: libraries = gomp
# tag: openmp
# distutils: extra_compile_args = -fopenmp
cimport
cython
cimport
cython
from
cython.parallel
import
prange
from
cython.parallel
import
prange
...
...
tests/run/parallel.pyx
View file @
acfbf762
# tag: run
# tag: run
# distutils: libraries = gomp
# tag: openmp
# distutils: extra_compile_args = -fopenmp
cimport
cython.parallel
cimport
cython.parallel
from
cython.parallel
import
prange
,
threadid
from
cython.parallel
import
prange
,
threadid
cimport
openmp
cimport
openmp
from
libc.stdlib
cimport
malloc
,
free
from
libc.stdlib
cimport
malloc
,
free
from
libc.stdio
cimport
puts
import
sys
try
:
from
builtins
import
next
# Py3k
except
ImportError
:
def
next
(
it
):
return
it
.
next
()
#@cython.test_assert_path_exists(
# "//ParallelWithBlockNode//ParallelRangeNode[@schedule = 'dynamic']",
# "//GILStatNode[@state = 'nogil]//ParallelRangeNode")
def
test_prange
():
"""
>>> test_prange()
(9, 9, 45, 45)
"""
cdef
Py_ssize_t
i
,
j
,
sum1
=
0
,
sum2
=
0
with
nogil
,
cython
.
parallel
.
parallel
:
for
i
in
prange
(
10
,
schedule
=
'dynamic'
):
sum1
+=
i
for
j
in
prange
(
10
,
nogil
=
True
):
sum2
+=
j
return
i
,
j
,
sum1
,
sum2
def
test_descending_prange
():
"""
>>> test_descending_prange()
5
"""
cdef
int
i
,
start
=
5
,
stop
=
-
5
,
step
=
-
2
cdef
int
sum
=
0
for
i
in
prange
(
start
,
stop
,
step
,
nogil
=
True
):
sum
+=
i
return
sum
def
test_propagation
():
"""
>>> test_propagation()
(9, 9, 9, 9, 450, 450)
"""
cdef
int
i
,
j
,
x
,
y
cdef
int
sum1
=
0
,
sum2
=
0
for
i
in
prange
(
10
,
nogil
=
True
):
for
j
in
prange
(
10
):
sum1
+=
i
with
nogil
,
cython
.
parallel
.
parallel
:
for
x
in
prange
(
10
):
with
cython
.
parallel
.
parallel
:
for
y
in
prange
(
10
):
sum2
+=
y
return
i
,
j
,
x
,
y
,
sum1
,
sum2
def
test_parallel
():
def
test_parallel
():
"""
"""
...
@@ -87,114 +24,4 @@ def test_parallel():
...
@@ -87,114 +24,4 @@ def test_parallel():
free
(
buf
)
free
(
buf
)
def
test_unsigned_operands
():
include
"sequential_parallel.pyx"
"""
This test is disabled, as this currently does not work (neither does it
for 'for i from x < i < y:'. I'm not sure we should strife to support
this, at least the C compiler gives a warning.
test_unsigned_operands()
10
"""
cdef
int
i
cdef
int
start
=
-
5
cdef
unsigned
int
stop
=
5
cdef
int
step
=
1
cdef
int
steps_taken
=
0
for
i
in
prange
(
start
,
stop
,
step
,
nogil
=
True
):
steps_taken
+=
1
return
steps_taken
def
test_reassign_start_stop_step
():
"""
>>> test_reassign_start_stop_step()
20
"""
cdef
int
start
=
0
,
stop
=
10
,
step
=
2
cdef
int
i
cdef
int
sum
=
0
for
i
in
prange
(
start
,
stop
,
step
,
nogil
=
True
):
start
=
-
2
stop
=
2
step
=
0
sum
+=
i
return
sum
def
test_closure_parallel_privates
():
"""
>>> test_closure_parallel_privates()
9 9
45 45
0 0 9 9
"""
cdef
int
x
def
test_target
():
nonlocal
x
for
x
in
prange
(
10
,
nogil
=
True
):
pass
return
x
print
test_target
(),
x
def
test_reduction
():
nonlocal
x
cdef
int
i
x
=
0
for
i
in
prange
(
10
,
nogil
=
True
):
x
+=
i
return
x
print
test_reduction
(),
x
def
test_generator
():
nonlocal
x
cdef
int
i
x
=
0
yield
x
x
=
2
for
i
in
prange
(
10
,
nogil
=
True
):
x
=
i
yield
x
g
=
test_generator
()
print
next
(
g
),
x
,
next
(
g
),
x
def
test_pure_mode
():
"""
>>> test_pure_mode()
0
1
2
3
4
4
3
2
1
0
0
"""
import
Cython.Shadow
pure_parallel
=
sys
.
modules
[
'cython.parallel'
]
for
i
in
pure_parallel
.
prange
(
5
):
print
i
for
i
in
pure_parallel
.
prange
(
4
,
-
1
,
-
1
,
schedule
=
'dynamic'
,
nogil
=
True
):
print
i
with
pure_parallel
.
parallel
:
print
pure_parallel
.
threadid
()
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