Fixed not to check timeout during the check table.

Fixed not to check timeout during the check table.

Problem - The failure on PB2 is possbily due to the port number being still in
          use even after the server restarts which is not reflected in the
          server restart.
      
Fix - The problem is fixed by starting the servers forcefully using the option
      file and also the parameters for the server restart is passed correctly.

mysql-test/suite/rpl/t/rpl_report_port-master.opt:
  Option file for the master.

rb://1043
approved by: Sunny Bains

Two internal counters were incremented twice for a single
operations. The counters are:
srv_buf_pool_flushed
buf_lru_flush_page_count

Fixed a cmake 2.8.8 compilation problem.

rb://1033
approved by: Marko Makela

Check return value from os_aio_init() and refuse to start if it fails.

rpl_auto_increment_bug45679.test is refined due to not fixed in 5.1 Bug11749859-39934.

Details:
 - test case bug12427262.test was failing on windows because
   on windows '/' was not recognized. And this was used in
   LIKE clause of the query being run in this test case.

Fix:
 - Windows needs '\\\\' for path seperater in mysql. I was 
   not sure how to keep a single query with two different 
   syntax based on platform. So modifying query to make sure
   it runs correctly on both platform.

Merge from 5.1 into 5.5.

Conflicts:
 * sql/log.h
 * sql/sql_repl.cc

The function mysql_show_binlog_events has a local stack variable
'LOG_INFO linfo;', which is assigned to thd->current_linfo, however
this variable goes out of scope and is destroyed before clean
thd->current_linfo.

The problem is solved by moving 'LOG_INFO linfo;' to function scope.

BUG#11761686 insert_id event is not filtered.
  
Two issues are covered.
  
INSERT into autoincrement field which is not the first part in the composed primary key 
is unsafe by autoincrement logging design. The case is specific to MyISAM engine
because Innodb does not allow such table definition.
  
However no warnings and row-format logging in the MIXED mode was done, and
that is fixed.
  
Int-, Rand-, User-var log-events were not filtered along with their parent
query that made possible them to screw up execution context of the following
query.
  
Fixed with deferring their execution until the parent query.

******
Bug#11754117 

Post review fixes.

mysql-test/suite/rpl/r/rpl_auto_increment_bug45679.result:
  a new result file is added.
mysql-test/suite/rpl/r/rpl_filter_tables_not_exist.result:
  results updated.
mysql-test/suite/rpl/t/rpl_auto_increment_bug45679.test:
  regression test for BUG#11754117-45670 is added.
mysql-test/suite/rpl/t/rpl_filter_tables_not_exist.test:
  regression test for filtering issue of BUG#11754117 - 45670 is added.
sql/log_event.cc:
  Logics are added for deferring and executing events associated 
  with the Query event.
sql/log_event.h:
  Interface to deferred events batch execution is added.
sql/rpl_rli.cc:
  initialization for new RLI members is added.
sql/rpl_rli.h:
  New members to RLI are added to facilitate deferred events gathering
  and execution control;
  two general character RLI cleanup methods are constructed.
sql/rpl_utility.cc:
  Deferred_log_events methods are difined.
sql/rpl_utility.h:
  A new class Deferred_log_events is defined to implement
  IRU events gathering, execution and cleanup.
sql/slave.cc:
  Necessary changes to initialize `rli->deferred_events' and prevent
  deferred event deletion in the main read-exec branch.
sql/sql_base.cc:
  A new safe-check function for multi-part pk with auto-increment is defined
  and deployed in lock_tables().
sql/sql_class.cc:
  Initialization for a new member and replication cleanups are added
  to THD class.
sql/sql_class.h:
  THD class receives a new member to hold a specific execution
  context for slave applier.
sql/sql_parse.cc:
  Execution of the deferred event in started prior to its parent query.

Details:
- Merge : 5.1 -> 5.5
- Addded a new test case which was not added in 5.1 because PS was
  not there in 5.1.

Reason:
 This is a regression happened because of changes done in code refactoring 
 in 5.1 from 5.0.

Issue: 
 While doing "Show tables" lex->verbose was being checked to avoid opening
 FRM files to get table type. In case of "Show full table", lex->verbose
 is true to indicate table type is required. In 5.0, this check was
 present which got missing in >=5.5.

Fix:
 Added the required check to avoid opening FRM files unnecessarily in case
 of "Show tables".

Stored program cache produces wrong result in same THD.

confusing error. Updated the test script to work properly on
windows platform. 

Merge from 5.1 into 5.5.

Currently SHOW MASTER LOGS and SHOW BINARY LOGS require the SUPER
privilege. Monitoring tools (such as MEM) often want to check this 
output - for instance MEM generates the SUM of the sizes of the logs 
reported here, and puts that in the Replication overview within the MEM
Dashboard.
However, because of the SUPER requirement, these tools often have an 
account that holds open the connection whilst monitoring, and can lock
out administrators when the server gets overloaded and reaches
max_connections - there is already another SUPER privileged account
connected, the "monitor". 

As SHOW MASTER STATUS, and all other replication related statements,
return with either REPLICATION CLIENT or SUPER privileges, this worklog 
is to make SHOW MASTER LOGS and SHOW BINARY LOGS be consistent with this
as well, and allow both of these commands with either SUPER or 
REPLICATION CLIENT. 
This allows monitoring tools to not require a SUPER privilege any more,
so is safer in overloaded situations, as well as being more secure, as 
lighter privileges can be given to users of such tools or scripts.

mysql-test/r/select.result:
  Added test result for Bug#12713907
mysql-test/t/select.test:
  Added test case for Bug#12713907
sql/sql_select.cc:
  Remove the call to set_keyread as we do it from access
  functions 'join_read_first' and 'join_read_last'

                   ORDER BY COUNT(*) LIMIT.

PROBLEM:
With respect to problem in the bug description, we
exhibit different behaviors for the two tables
presented, because innodb statistics (rec_per_key
in this case) are updated for the first table
and not so for the second one. As a result the
query plan gets changed in test_if_skip_sort_order
to use 'index' scan. Hence the difference in the
explain output. (NOTE: We can reproduce the problem
with first table by reducing the number of tuples
and changing the table structure)

The varied output w.r.t the query on the second table
is because of the result in the query plan change.
When a query plan is changed to use 'index' scan,
after the call to test_if_skip_sort_order, we set
keyread to TRUE immedietly. If for some reason
we drop this index scan for a filesort later on,
we fetch only the keys not the entire tuple.
As a result we would see junk values in the result set.

Following is the code flow:

Call test_if_skip_sort_order
-Choose an index to give sorted output
-If this is a covering index, set_keyread to TRUE
-Set the scan to INDEX scan

Call test_if_skip_sort_order second time
-Index is not chosen (note that we do not pass the
actual limit value second time. Hence we do not choose
index scan second time which in itself is a bug fixed
in 5.6 with WL#5558)
-goto filesort

Call filesort
-Create quick range on a different index
-Since keyread is set to TRUE, we fetch only the columns of
the index
-results in the required columns are not fetched

FIX:
Remove the call to set_keyread(TRUE) from
test_if_skip_sort_order. The access function which is
'join_read_first' or 'join_read_last' calls set_keyread anyways.


mysql-test/r/func_group_innodb.result:
  Added test result for Bug#12713907
mysql-test/t/func_group_innodb.test:
  Added test case for Bug#12713907
sql/sql_select.cc:
  Remove the call to set_keyread as we do it from access
  functions 'join_read_first' and 'join_read_last'

confusing error. I have added the not_embedded.inc in the test file.

UNHANDLED, CONFUSING ERROR

The main confusion with the error message is that "it 
implies that your data dictionary may now be out of 
sync".  This patch will remove the unwanted and the 
misleading error message by not doing an unnecessary 
operation in the error handling code.  

rb://980 approved by: Dmitry Lenev

PROBLEM:

--------

When binary log statements are replayed on the slave, BEGIN is represented

in com_counters but COMMIT is not. Similarly in 'ROW' based replication

'INSERT','UPDATE',and 'DELETE' com_counters are not getting incremented

when the binary log statements are replayed at slave.

ANALYSIS:
---------

In 'ROW' based replication for COMMIT,INSERT,UPDATE and DELETE operations
following special events are invoked.
Xid_log_event,Write_rows_log_event,Update_rows_log_event,Update_rows_log_event.

The above mentioned events doesn't go through the parser where the
'COM_COUNTERS' are incremented.


FIX:
-----
Increment statements are added at appropriate events.
Respective functions are listed below.

'Xid_log_event::do_apply_event'
'Write_rows_log_event::do_before_row_operations'
'Update_rows_log_event::do_before_row_operations'
'Delete_rows_log_event::do_before_row_operations' 

sql/log_event.cc:
  Added code to increment counts for 'COM_INSERT','COM_UPDATE',
  'COM_DELETE' and 'COM_COMMIT'during ROW based replicaiton

                    TABLES IN INCORRECT ENGINE

PROBLEM:
  CREATE/ALTER TABLE currently can move system tables like
mysql.db, user, host etc, to engines other than MyISAM. This is not
completely supported as of now, by mysqld. When some of system tables
like plugin, servers, event, func, *_priv, time_zone* are moved
to innodb, mysqld restart crashes. Currently system tables
can be moved to BLACKHOLE also!!!.

ANALYSIS:
  The problem is that there is no check before creating or moving
a system table to some particular engine.

  System tables are suppose to be residing in MyISAM. We can think
of restricting system tables to exist only in MyISAM. But, there could
be future needs of these system tables to be part of other engines
by design. For eg, NDB cluster expects some tables to be on innodb
or ndb engine. This calls for a solution, by which system
tables can be supported by any desired engine, with minimal effort.

FIX:
  The solution provides a handlerton interface using which,
mysqld server can query particular storage engine handlerton for
system tables that it supports. This way each storage engine
layer can define their own system database and system tables.

  The check_engine() function uses the new handlerton function
ha_check_if_supported_system_table() to check if db.tablename
provided in the DDL is supported by the SE.

Note: This fix has modified a test in help.test, which was moving
mysql.help_* to innodb. The primary intention of the test was not
to move them between engines.