Ensure all refs are restored on a restore from backup
To restore all refs from a bundle, we need to use the --mirror option to ensure that all refs are properly restored. Without this, refs such as `refs/merge-requests/X` and `refs/keep-around/Y` would be omitted, which exposed a bug as described in https://gitlab.com/gitlab-org/gitlab-ce/issues/38319#note_41648608. Closes #38352
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