this should simplify run-time cluster management

Test code modifications and new failures from buildbot registered
only for the main suite. The rest was updated partially,
based on the status of existing JIRA items

Use size_t everywhere and remove suspicious expression.

win

Fixed by the author in other way (char -> short)

This reverts commit 496f7090.

Since 2017 (c2118a08) THD::awake() no longer requires LOCK_thd_data.
It uses LOCK_thd_kill, and this latter mutex is used to prevent
a thread of dying, not LOCK_thd_data as before.

and it is that important to be run every time

innodb_shutdown(): Check that fil_system.temp_space is not null
before invoking a member function.

This regression was caused by the merge
commit fa1aef39
of MDEV-24340 (commit 1eb59c30).

Test code modifications and new failures from buildbot only
registered for the main suite. The rest was updated partially,
based on the status of existing JIRA items

Skipping the package within debian/rules won't work because starting
with Debian 10, the helper scripts read the control file before the
recipe.

bson.cpp:1775:3: error: case label value is less than minimum value for type [-Werror]
   case TYPE_NULL:
bson.cpp:1776:7: error: statement will never be executed [-Werror=switch-unreachable]
     b = true;

check that we can do type casting

Apply the patch based on the patch by Varun Gupta:

PARAM::is_ror_scan might be used unitialized when check_quick_select()
is invoked for a "degenerate" SEL_ARG tree (e.g. one having type
SEL_ARG::IMPOSSIBLE).

Make check_quick_select() always initialize PARAM::is_ror_scan.

Problem is that not all plugins are loaded when wsrep_recover is executed.
Thus, we allow unknown system variables and extra system variables during
wsrep_recover. Any unknown system variables would still be caught when
the server starts up normally after the SST.

This was because OpenBSD (and others) can be missing HAVE_BACKTRACE / HAVE_BACKTRACE_FD
which is the condition for my_safe_print_str to be defined.

Fixes:
/prj/tmp/work/cortexa57-poky-linux-musl/mariadb/10.5.8-r0/recipe-sysroot-native/usr/bin/aarch64-poky-linux-musl/../../libexec/aarch64-poky-linux-musl/gcc/aarch64-poky-linux-musl/10.2.0/ld.bfd: /usr/src/debug/mariadb/10.5.8-r0/mariadb-10.5.8/unittest/mysys/stacktrace-t.c:36: undefined reference to `my_safe_print_str'
Signed-off-by: Mingli Yu <mingli.yu@windriver.com>

  modified:   storage/connect/bson.cpp
  modified:   storage/connect/bson.h
  modified:   storage/connect/bsonudf.cpp
  modified:   storage/connect/bsonudf.h
  modified:   storage/connect/ha_connect.cc
  modified:   storage/connect/jsonudf.cpp
  modified:   storage/connect/mysql-test/connect/r/bson.result
  modified:   storage/connect/mysql-test/connect/r/bson_udf.result
  modified:   storage/connect/mysql-test/connect/t/bson_udf.inc
  modified:   storage/connect/mysql-test/connect/t/bson_udf.test
  modified:   storage/connect/mysql-test/connect/t/bson_udf2.inc
  modified:   storage/connect/tabbson.cpp
  modified:   storage/connect/tabbson.h

Analysis:
=========

Reason for test failure was a mutex deadlock between DeadlockChecker with stack

Thread 6 (Thread 0xffff70066070 (LWP 24667)):
0  0x0000ffff784e850c in __lll_lock_wait (futex=futex@entry=0xffff04002258, private=0) at lowlevellock.c:46
1  0x0000ffff784e19f0 in __GI___pthread_mutex_lock (mutex=mutex@entry=0xffff04002258) at pthread_mutex_lock.c:135
2  0x0000aaaaac8cd014 in inline_mysql_mutex_lock (src_file=0xaaaaacea0f28 "/home/buildbot/buildbot/build/mariadb-10.2.37/sql/wsrep_thd.cc", src_line=762, that=0xffff04002258) at /home/buildbot/buildbot/build/mariadb-10.2.37/include/mysql/psi/mysql_thread.h:675
3  wsrep_thd_is_BF (thd=0xffff040009a8, sync=sync@entry=1 '\001') at /home/buildbot/buildbot/build/mariadb-10.2.37/sql/wsrep_thd.cc:762
4  0x0000aaaaacadce68 in lock_rec_has_to_wait (for_locking=false, lock_is_on_supremum=<optimized out>, lock2=0xffff628952d0, type_mode=291, trx=0xffff62894070) at /home/buildbot/buildbot/build/mariadb-10.2.37/storage/innobase/lock/lock0lock.cc:826
5  lock_has_to_wait (lock1=<optimized out>, lock2=0xffff628952d0) at /home/buildbot/buildbot/build/mariadb-10.2.37/storage/innobase/lock/lock0lock.cc:873
6  0x0000aaaaacadd0b0 in DeadlockChecker::search (this=this@entry=0xffff70061fe8) at /home/buildbot/buildbot/build/mariadb-10.2.37/storage/innobase/lock/lock0lock.cc:7142
7  0x0000aaaaacae2dd8 in DeadlockChecker::check_and_resolve (lock=lock@entry=0xffff62894120, trx=trx@entry=0xffff62894070) at /home/buildbot/buildbot/build/mariadb-10.2.37/storage/innobase/lock/lock0lock.cc:7286
8  0x0000aaaaacae3070 in lock_rec_enqueue_waiting (c_lock=0xffff628952d0, type_mode=type_mode@entry=3, block=block@entry=0xffff62076c40, heap_no=heap_no@entry=2, index=index@entry=0xffff4c076f28, thr=thr@entry=0xffff4c078810, prdt=prdt@entry=0x0) at /home/buildbot/buildbot/build/mariadb-10.2.37/storage/innobase/lock/lock0lock.cc:1796
9  0x0000aaaaacae3900 in lock_rec_lock_slow (thr=0xffff4c078810, index=0xffff4c076f28, heap_no=2, block=0xffff62076c40, mode=3, impl=0) at /home/buildbot/buildbot/build/mariadb-10.2.37/storage/innobase/lock/lock0lock.cc:2106
10 lock_rec_lock (impl=false, mode=3, block=0xffff62076c40, heap_no=2, index=0xffff4c076f28, thr=0xffff4c078810) at /home/buildbot/buildbot/build/mariadb-10.2.37/storage/innobase/lock/lock0lock.cc:2168
11 0x0000aaaaacae3ee8 in lock_sec_rec_read_check_and_lock (flags=flags@entry=0, block=block@entry=0xffff62076c40, rec=rec@entry=0xffff6240407f "\303\221\342\200\232\303\220\302\265\303\220\302\272\303\221\302\201\303\221\342\200\232", index=index@entry=0xffff4c076f28, offsets=0xffff4c080690, offsets@entry=0xffff70062a30, mode=LOCK_X, mode@entry=1653162096, gap_mode=0, gap_mode@entry=281470749427104, thr=thr@entry=0xffff4c078810) at /home/buildbot/buildbot/build/mariadb-10.2.37/storage/innobase/lock/lock0lock.cc:6082
12 0x0000aaaaacb684c4 in sel_set_rec_lock (pcur=0xaaaac841c270, pcur@entry=0xffff4c077d58, rec=0xffff6240407f "\303\221\342\200\232\303\220\302\265\303\220\302\272\303\221\302\201\303\221\342\200\232", rec@entry=0x28 <error: Cannot access memory at address 0x28>, index=index@entry=0xffff4c076f28, offsets=0xffff70062a30, mode=281472334905456, type=281470749427104, thr=0xffff4c078810, thr@entry=0x9f, mtr=0x0, mtr@entry=0xffff70063928) at /home/buildbot/buildbot/build/mariadb-10.2.37/storage/innobase/row/row0sel.cc:1270
13 0x0000aaaaacb6bb64 in row_search_mvcc (buf=buf@entry=0xffff4c080690 "\376\026", mode=mode@entry=PAGE_CUR_GE, prebuilt=0xffff4c077b98, match_mode=match_mode@entry=1, direction=direction@entry=0) at /home/buildbot/buildbot/build/mariadb-10.2.37/storage/innobase/row/row0sel.cc:5181
14 0x0000aaaaacaae568 in ha_innobase::index_read (this=0xffff4c038a80, buf=0xffff4c080690 "\376\026", key_ptr=<optimized out>, key_len=768, find_flag=<optimized out>) at /home/buildbot/buildbot/build/mariadb-10.2.37/storage/innobase/handler/ha_innodb.cc:9393
15 0x0000aaaaac9201cc in handler::ha_index_read_map (this=0xffff4c038a80, buf=0xffff4c080690 "\376\026", key=0xffff4c07ccf8 "", keypart_map=keypart_map@entry=18446744073709551615, find_flag=find_flag@entry=HA_READ_KEY_EXACT) at /home/buildbot/buildbot/build/mariadb-10.2.37/sql/handler.cc:2718
16 0x0000aaaaac9f36b0 in Rows_log_event::find_row (this=this@entry=0xffff4c030098, rgi=rgi@entry=0xffff4c01b510) at /home/buildbot/buildbot/build/mariadb-10.2.37/sql/log_event.cc:13461
17 0x0000aaaaac9f3e44 in Update_rows_log_event::do_exec_row (this=0xffff4c030098, rgi=0xffff4c01b510) at /home/buildbot/buildbot/build/mariadb-10.2.37/sql/log_event.cc:13936
18 0x0000aaaaac9e7ee8 in Rows_log_event::do_apply_event (this=0xffff4c030098, rgi=0xffff4c01b510) at /home/buildbot/buildbot/build/mariadb-10.2.37/sql/log_event.cc:11101
19 0x0000aaaaac8ca4e8 in Log_event::apply_event (rgi=0xffff4c01b510, this=0xffff4c030098) at /home/buildbot/buildbot/build/mariadb-10.2.37/sql/log_event.h:1454
20 wsrep_apply_events (buf_len=0, events_buf=0x1, thd=0xffff4c0009a8) at /home/buildbot/buildbot/build/mariadb-10.2.37/sql/wsrep_applier.cc:164
21 wsrep_apply_cb (ctx=0xffff4c0009a8, buf=0x1, buf_len=18446743528248705000, flags=<optimized out>, meta=<optimized out>) at /home/buildbot/buildbot/build/mariadb-10.2.37/sql/wsrep_applier.cc:267
22 0x0000ffff7322d29c in galera::TrxHandle::apply (this=this@entry=0xffff4c027960, recv_ctx=recv_ctx@entry=0xffff4c0009a8, apply_cb=apply_cb@entry=0xaaaaac8c9fe8 <wsrep_apply_cb(void*, void const*, size_t, uint32_t, wsrep_trx_meta_t const*)>, meta=...) at /home/buildbot/buildbot/build/galera/src/trx_handle.cpp:317
23 0x0000ffff73239664 in apply_trx_ws (recv_ctx=recv_ctx@entry=0xffff4c0009a8, apply_cb=0xaaaaac8c9fe8 <wsrep_apply_cb(void*, void const*, size_t, uint32_t, wsrep_trx_meta_t const*)>, commit_cb=0xaaaaac8ca8d0 <wsrep_commit_cb(void*, uint32_t, wsrep_trx_meta_t const*, wsrep_bool_t*, bool)>, trx=..., meta=...) at /home/buildbot/buildbot/build/galera/src/replicator_smm.cpp:34
24 0x0000ffff7323c0c4 in galera::ReplicatorSMM::apply_trx (this=this@entry=0xaaaac7c7ebc0, recv_ctx=recv_ctx@entry=0xffff4c0009a8, trx=trx@entry=0xffff4c027960) at /home/buildbot/buildbot/build/galera/src/replicator_smm.cpp:454
25 0x0000ffff7323e8b8 in galera::ReplicatorSMM::process_trx (this=0xaaaac7c7ebc0, recv_ctx=0xffff4c0009a8, trx=0xffff4c027960) at /home/buildbot/buildbot/build/galera/src/replicator_smm.cpp:1258
26 0x0000ffff73268f68 in galera::GcsActionSource::dispatch (this=this@entry=0xaaaac7c7f348, recv_ctx=recv_ctx@entry=0xffff4c0009a8, act=..., exit_loop=@0xffff7006535f: false) at /home/buildbot/buildbot/build/galera/src/gcs_action_source.cpp:115
27 0x0000ffff73269dd0 in galera::GcsActionSource::process (this=0xaaaac7c7f348, recv_ctx=0xffff4c0009a8, exit_loop=@0xffff7006535f: false) at /home/buildbot/buildbot/build/galera/src/gcs_action_source.cpp:180
28 0x0000ffff7323ef5c in galera::ReplicatorSMM::async_recv (this=0xaaaac7c7ebc0, recv_ctx=0xffff4c0009a8) at /home/buildbot/buildbot/build/galera/src/replicator_smm.cpp:362
29 0x0000ffff73217760 in galera_recv (gh=<optimized out>, recv_ctx=<optimized out>) at /home/buildbot/buildbot/build/galera/src/wsrep_provider.cpp:244
30 0x0000aaaaac8cb344 in wsrep_replication_process (thd=0xffff4c0009a8) at /home/buildbot/buildbot/build/mariadb-10.2.37/sql/wsrep_thd.cc:486
31 0x0000aaaaac8bc3a0 in start_wsrep_THD (arg=arg@entry=0xaaaac7cb3e38) at /home/buildbot/buildbot/build/mariadb-10.2.37/sql/wsrep_mysqld.cc:2173
32 0x0000aaaaaca89198 in pfs_spawn_thread (arg=<optimized out>) at /home/buildbot/buildbot/build/mariadb-10.2.37/storage/perfschema/pfs.cc:1869
33 0x0000ffff784defc4 in start_thread (arg=0xaaaaaca890d8 <pfs_spawn_thread(void*)>) at pthread_create.c:335
34 0x0000ffff7821c3f0 in thread_start () at ../sysdeps/unix/sysv/linux/aarch64/clone.S:89

and background victim transaction kill with stack

Thread 28 (Thread 0xffff485fa070 (LWP 24870)):
0  0x0000ffff784e530c in __pthread_cond_wait (cond=cond@entry=0xaaaac83e98e0, mutex=mutex@entry=0xaaaac83e98b0) at pthread_cond_wait.c:186
1  0x0000aaaaacb10788 in os_event::wait (this=0xaaaac83e98a0) at /home/buildbot/buildbot/build/mariadb-10.2.37/storage/innobase/os/os0event.cc:158
2  os_event::wait_low (reset_sig_count=2, this=0xaaaac83e98a0) at /home/buildbot/buildbot/build/mariadb-10.2.37/storage/innobase/os/os0event.cc:325
3  os_event_wait_low (event=0xaaaac83e98a0, reset_sig_count=<optimized out>) at /home/buildbot/buildbot/build/mariadb-10.2.37/storage/innobase/os/os0event.cc:507
4  0x0000aaaaacb98480 in sync_array_wait_event (arr=arr@entry=0xaaaac7dbb450, cell=@0xffff485f96e8: 0xaaaac7dbb560) at /home/buildbot/buildbot/build/mariadb-10.2.37/storage/innobase/sync/sync0arr.cc:471
5  0x0000aaaaacab53c8 in TTASEventMutex<GenericPolicy>::enter (line=19524, filename=0xaaaaacf2ce40 "/home/buildbot/buildbot/build/mariadb-10.2.37/storage/innobase/handler/ha_innodb.cc", max_delay=<optimized out>, max_spins=0, this=0xaaaac83cc8c0) at /home/buildbot/buildbot/build/mariadb-10.2.37/storage/innobase/include/ib0mutex.h:516
6  PolicyMutex<TTASEventMutex<GenericPolicy> >::enter (this=0xaaaac83cc8c0, n_spins=<optimized out>, n_delay=<optimized out>, name=0xaaaaacf2ce40 "/home/buildbot/buildbot/build/mariadb-10.2.37/storage/innobase/handler/ha_innodb.cc", line=19524) at /home/buildbot/buildbot/build/mariadb-10.2.37/storage/innobase/include/ib0mutex.h:637
7  0x0000aaaaacaaa52c in bg_wsrep_kill_trx (void_arg=0xffff4c057430) at /home/buildbot/buildbot/build/mariadb-10.2.37/storage/innobase/handler/ha_innodb.cc:19524
8  0x0000aaaaac79e7f0 in handle_manager (arg=arg@entry=0x0) at /home/buildbot/buildbot/build/mariadb-10.2.37/sql/sql_manager.cc:112
9  0x0000aaaaaca89198 in pfs_spawn_thread (arg=<optimized out>) at /home/buildbot/buildbot/build/mariadb-10.2.37/storage/perfschema/pfs.cc:1869
10 0x0000ffff784defc4 in start_thread (arg=0xaaaaaca890d8 <pfs_spawn_thread(void*)>) at pthread_create.c:335
11 0x0000ffff7821c3f0 in thread_start () at ../sysdeps/unix/sysv/linux/aarch64/clone.S:89

Fix:
====

Do not use THD::LOCK_thd_data mutex if we already hold lock_sys->mutex because it
will cause mutexing order violation. Victim transaction holding conflicting
locks can't be committed or rolled back while we hold lock_sys->mutex. Thus,
it is safe to do wsrep_thd_is_BF call with no additional mutexes.

statistics calculation

 Analysis: When --replace or --insert-ignore is not given, dumping of
mysql.innodb_index_stats and mysql.innodb_table_stats will result into race
condition.
Fix: Check if these options are present with --system=stats (because dumping
under --system=stats is safe). Otherwise, dump only structure, ignoring data
because innodb will recalculate data anyway.