MDEV-33308 CHECK TABLE is modifying .frm file even if --read-only

As noted in commit d0ef1aaf,
MySQL as well as older versions of MariaDB server would during
ALTER TABLE ... IMPORT TABLESPACE write bogus values to the
PAGE_MAX_TRX_ID field to pages of the clustered index, instead of
letting that field remain 0.
In commit 8777458a this field
was repurposed for PAGE_ROOT_AUTO_INC in the clustered index root page.

To avoid trouble when upgrading from MySQL or older versions of MariaDB,
we will try to detect and correct bogus values of PAGE_ROOT_AUTO_INC
when opening a table for the first time from the SQL layer.

btr_read_autoinc_with_fallback(): Add the parameters to mysql_version,max
to indicate the TABLE_SHARE::mysql_version of the .frm file and the
maximum value allowed for the type of the AUTO_INCREMENT column.
In case the table was originally created in MySQL or an older version of
MariaDB, read also the maximum value of the AUTO_INCREMENT column from
the table and reset the PAGE_ROOT_AUTO_INC if it is above the limit.

dict_table_t::get_index(const dict_col_t &) const: Find an index that
starts with the specified column.

ha_innobase::check_for_upgrade(): Return HA_ADMIN_FAILED if InnoDB
needs upgrading but is in read-only mode. In this way, the call to
update_frm_version() will be skipped.

row_import_autoinc(): Adjust the AUTO_INCREMENT column at the end of
ALTER TABLE...IMPORT TABLESPACE. This refinement was suggested by
Debarun Banerjee.

The changes outside InnoDB were developed by Michael 'Monty' Widenius:

Added print_check_msg() service for easy reporting of check/repair messages
in ENGINE=Aria and ENGINE=InnoDB.
Fixed that CHECK TABLE do not update the .frm file under --read-only.
Added 'handler_flags' to HA_CHECK_OPT as a way for storage engines to
store state from handler::check_for_upgrade().

Reviewed by: Debarun Banerjee

Recording both is useful on a replication relay when the backup
can be used to replace the server, or ack as a new replica to the
server.

If an option=2, commented is selected, allow the alternate option
to exist.

This still disables --dump-slave=1 --master-data=1 as having the
a CHANGE MASTER TO and START SLAVE on different positions would be
confusing and dangerious to the try to execute the output. The
previous behaviour of silently disabling --master-data occurs in
this case.

The commented code related to --dump-slave/--master-data is greatly
expanded for human consumption.

A redundant opt_slave_data= 0 was removed from get_opts. If
--dump-slave=1 or 2, then the only possible value of --master-data
is a valid one.

Re-order to preference gtid based replication.

Based of code from Elena Stepanova.

Review by: Brandon Nesterenko and Anel Husakovic

This will make it easier to show changes.

MDEV-32899 InnoDB is holding shared dict_sys.latch while waiting for FOREIGN KEY child table lock on DDL

lock_table_children(): A new function to lock all child tables of a table.
We will only hold dict_sys.latch while traversing
dict_table_t::referenced_set. To prevent a race condition with
std::set::erase() we will copy the pointers to the child tables to a
local vector. Once we have acquired MDL and references to all child tables,
we can safely release dict_sys.latch, wait for the locks, and finally
release the references.

dict_acquire_mdl_shared(): A new variant that takes mdl_context as a
parameter.

lock_table_for_trx(): Assert that we are not holding dict_sys.latch.

ha_innobase::truncate(): When foreign_key_checks=ON, assert that
no child tables exist (other than the current table).
In any case, we will invoke lock_table_children()
so that the child table metadata can be safely updated.
(It is possible that a child table is being created concurrently
with TRUNCATE TABLE.)

ha_innobase::delete_table(): Before and after acquiring exclusive
locks on the current table as well as all child tables,
check that FOREIGN KEY constraints will not be violated.
In this way, we can reject impossible DROP TABLE without having to
wait for locks first.

This fixes up commit 2ca11234 (MDEV-26217)
and commit c3c53926 (MDEV-26554).

While the index_lock and block_lock include debug instrumentation
to keep track of shared lock holders, such instrumentation was
never part of the simpler srw_lock, and therefore some users of the
class implemented a limited form of bookkeeping.

srw_lock_debug encapsulates srw_lock and adds the data members
writer, readers_lock, and readers to keep track of the threads that
hold the exclusive latch or any shared latches. The debug checks
are available also with SUX_LOCK_GENERIC (in environments that do not
implement a futex-like system call).

dict_sys_t::latch: Use srw_lock_debug in debug builds.
This makes the debug fields latch_ex, latch_readers redundant.

fil_space_t::latch: Use srw_lock_debug in debug builds.
This makes the debug field latch_count redundant.
The field latch_owner must be preserved, because
fil_space_t::is_owner() is being used in all builds.

lock_sys_t::latch: Use srw_lock_debug in debug builds.
This makes the debug fields writer, readers redundant.

lock_sys_t::is_holder(): A new debug predicate to check if
the current thread is holding lock_sys.latch in any mode.

trx_rseg_t::latch: Use srw_lock_debug in debug builds.

If we fail to open a tablespace while looking for FILE_CHECKPOINT, we
set the corruption flag. Specifically, if encryption key is missing, we
would not be able to open an encrypted tablespace and the flag could be
set. We miss checking for this flag and report "Missing FILE_CHECKPOINT"

Address review comment to improve the test. Flush pages before starting
no-checkpoint block. It should improve the number of cases where the
test is skipped because some intermediate checkpoint is triggered.

Fix inconsistent definition of PERFORMANCE_SCHEMA.REPLICATION_APPLIER_STATUS.COUNT_TRANSACTIONS_RETRIES column

This column (`COUNT_TRANSACTIONS_RETRIES`) is defined as `BIGINT UNSIGNED`
(64-bit unsigned integer) in the user-visible SQL definition:
https://github.com/MariaDB/server/blob/182ff21ace34ea4f00fb5b66689b172323d91f99/storage/perfschema/table_replication_applier_status.cc#L66

    "COUNT_TRANSACTIONS_RETRIES BIGINT unsigned not null comment 'The number of retries that were made because the replication SQL thread failed to apply a transaction.',"

And its value is internally set/updated using the `set_field_ulonglong`
function:
https://github.com/MariaDB/server/blob/182ff21ace34ea4f00fb5b66689b172323d91f99/storage/perfschema/table_replication_applier_status.cc#L231-L233

    case 3: /* total number of times transactions were retried */
      set_field_ulonglong(f, m_row.count_transactions_retries);
      break;

… but the structure where it is stored allocates only `ulong` for it:
https://github.com/MariaDB/server/blob/182ff21ace34ea4f00fb5b66689b172323d91f99/storage/perfschema/table_replication_applier_status.h#L62

    ulong count_transactions_retries;

As a result of this inconsistency:

1. On any platform where `ulong` is `uint32_t` and `ulonglong` is `uint64_t`,
   setting this value would corrupt the 4 bytes of memory *following* the 4
   bytes actually allocated for it.

   Likely this problem was never noticed because this is the final element in
   the structure, and the structure is padded by the compiler to prevent
   memory corruption errors.

2. On any BIG-ENDIAN platform where `ulong` is `uint32_t` and `ulonglong`
   is `uint64_t`, reading back the value of this column will result in
   total garbage.

   Likely this problem was never noticed because MariaDB has not been
   tested on 32-bit big-endian platforms.

In order not to affect the user-visible/SQL definition of this column, the
correct way to fix this issue is to change it to `ulonglong` in the
structure definition.  See
https://github.com/MariaDB/server/pull/2763/files#r1329110832 for the
original identification and discussion of this issue.

All new code of the whole pull request, including one or several files
that are either new files or modified ones, are contributed under the BSD-new
license. I am contributing on behalf of my employer Amazon Web Services

As was done in dc771113 for `support-files/CMakeLists.txt`
Do not rely on existence of `CMakeFiles/${target}.dir` directory
existence. It is not there for custom targets in Ninja build.

This regression was introduced in #1131 which likely copied the pattern
from e79e8406 before that regression was addressed in dc771113.

All new code of the whole pull request, including one or several files
that are either new files or modified ones, are contributed under the
BSD-new license. I am contributing on behalf of my employer Amazon Web
Services.

mariadb-backup with --prepare option could result in empty redo log
file. When --prepare is followed by --prepare --export, we exit early
in srv_start function without opening the ibdata1 tablespace. Later
while trying to read rollback segment header page, we hit the debug
assert which claims that the system space should already have been
opened.

There are two assert cases here.

Issue-1: System tablespace object is not there in fil space hash i.e.
srv_sys_space.open_or_create() is not called.

Issue-2: The system tablespace data file ibdata1 is not opened i.e.
fil_system.sys_space->open() is not called.

Fix: For empty redo log and restore operation, open system tablespace
before returning.

This follows up commit 383f77cd
which simplified dict_table_schema_check().

Note: We can display quoted names like this:
my_snprintf(buf, sizeof buf, "%`.*s.%`s",
            int(t->name.dblen()), t->name.m_name, t->name.basename());

THE FIX MUST NOT BE MERGED TO 10.6+, BECAUSE 10.6+ IS NOT AFFECTED!

The test is waiting for delete-marked record purging. But this does not
happen under the following conditions:

1. "START TRANSACTION WITH CONSISTENT SNAPSHOT" - is active, has not
been rolled back yet
2. "DELETE FROM t WHERE b = 20 # trx_1" - is committed
3. "INSERT INTO t VALUES(10, 20) # trx_2" - hanging on
"ib_after_row_insert" sync point, waiting for "first_ins_cont" signal
4. "DELETE FROM t WHERE b = 20 # trx_3" - blocked on delete-marked by
trx_1 record, waiting for trx_2
5. connection "default" is waiting on
'now WAIT_FOR row_purge_del_mark_finished'

purge_coordinator_callback_low() sets

purge_state.m_history_length= srv_do_purge(&n_total_purged);

even if nothing was purged, like in our case. Nothing was purged because
transaction with consistent snapshot was still alive during purging
procedure.

Then purge_coordinator_timer_callback() does not wake purge thread if
the following condition is true:

purge_state.m_history_length == trx_sys.rseg_history_len

The above condition is true for our case, because we are waiting for
delete-marked record purging, and trx_sys.rseg_history_len does not
grow.

Only 10.5 is affected, because there is no such condition in 10.6, i.e.
purge thread is woken up even if history size was not changed during
purge coordinator thread suspending.

The easiest way to fix it is just to remove the test from 10.5.

- Failed to reset the innodb_fil_make_page_dirty_debug variable in
innodb_saved_page_number_debug_basic test case.

Without an OS error it could one of the many errors from write.

An attempt to fix lost output sometimes seen on buildbot.

MDEV-18288 Transportable Tablespaces leave AUTO_INCREMENT in mismatched state, causing INSERT errors in newly imported tables when .cfg is not used.

During import, if cfg file is not specified, we don't update the autoinc
field in innodb dictionary object dict_table_t. The next insert tries to
insert from the starting position of auto increment and fails.

It can be observed that the issue is resolved once server is restarted
as the persistent value is read correctly from PAGE_ROOT_AUTO_INC from
index root page. The patch fixes the issue by reading the the auto
increment value directly from PAGE_ROOT_AUTO_INC during import if cfg
file is not specified.

Test Fix:

1. import_bugs.test: Embedded mode warning has absolute path. Regular
expression replacement in test.

2. full_crc32_import.test: Table level auto increment mismatch after
import. It was using the auto increment data from the table prior to
discard and import which is not right. This value has cached auto
increment value higher than the actual inserted value and value stored
in PAGE_ROOT_AUTO_INC. Updated the result file and added validation for
checking the maximum value of auto increment column.

MDEV-32551 changed rpl/t/rpl_session_var.test to show its
semi-sync status, as it added a semi-sync version of the
test (rpl_session_var2). The result was re-recorded in the
rpl suite, but there is an engines/funcs counter-part result
file that uses the same .test file which also needed to be
re-recorded.

Add UTF8_IS_UTF8MB3 to the (session) old_mode in connections made with
sql service to run init queries

The connection is new and the global variable value takes effect
rather than the session value from the caller of spider_db_init

This bug led to wrong result sets returned by the second execution of
prepared statements from selects using mergeable derived tables pushed
into external engine. Such derived tables are always materialized. The
decision that they have to be materialized is taken late in the function
mysql_derived_optimized(). For regular derived tables this decision is
usually taken at the prepare phase. However in some cases for some derived
tables this decision is made in mysql_derived_optimized() too. It can be
seen in the code of mysql_derived_fill() that for such a derived table it's
critical to change its translation table to tune it to the fields of the
temporary table used for materialization of the derived table and this
must be done after each refill of the derived table. The same actions are
needed for derived tables pushed into external engines.

Approved by Oleksandr Byelkin <sanja@mariadb.com>

@@ -314,7 +314,7 @@
 select straight_join * from t0, part ignore index (primary)
 where p_partkey=t0.a and p_size=1;
 id	select_type	table	type	possible_keys	key	key_len	ref	rows	Extra
-1	SIMPLE	t0	ALL	NULL	NULL	NULL	NULL	5	Using where
+1	SIMPLE	t0	ALL	NULL	NULL	NULL	NULL	6	Using where
 1	SIMPLE	part	eq_ref	i_p_size	i_p_size	9	const,dbt3_s001.t0.a	1

Variant#3: moved the logic out of create_key_parts_for_pseudo_indexes

Range Analyzer (get_mm_tree functions) can only process up to MAX_KEY=64
indexes. The problem was that calculate_cond_selectivity_for_table used
it to estimate selectivities for columns, and since a table can
have > MAX_KEY columns, would invoke Range Analyzer with more than MAX_KEY
"pseudo-indexes".

Fixed by making calculate_cond_selectivity_for_table() to run Range
Analyzer with at most MAX_KEY pseudo-indexes. If there are more
columns to process, Range Analyzer will be invoked multiple times.

Also made this change:
-    param.real_keynr[0]= 0;
+    MEM_UNDEFINED(&param.real_keynr, sizeof(param.real_keynr));

Range Analyzer should have no use on real_keynr when it is run with
pseudo-indexes.

mariadb-backup:

Adding a function get_os_user() to detect the OS user name
if the user name is not specified, to make mariadb-backup:
- work like MariaDB client tools work
- match its --help page, which says:

  -u, --user=name This option specifies the username used when
  connecting to the server, if that's not the current user.

MDEV-33355 Add a Galera-2-node-to-MariaDB replication MTR test cloning the slave with mariadb-backup

Replication from a 2-node Galera cluster to a regular MariaDB server.
Cloning the slave using mariadb-backup.

even if pkg-config has it. otherwise build dependencies
aren't detected.

According to the standard, the autoincrement column (i.e. *identity
column*) should be advanced each insert implicitly made by
UPDATE/DELETE ... FOR PORTION.

This is very unconvenient use in several notable cases. Concider a
WITHOUT OVERLAPS key with an autoinc column:
id int auto_increment, unique(id, p without overlaps)

An update or delete with FOR PORTION creates a sense that id will remain
unchanged in such case.

The standard's IDENTITY reminds MariaDB's AUTO_INCREMENT, however
the generation rules differ in many ways. For example, there's also a
notion autoincrement index, which is bound to the autoincrement field.

We will define our own generation rule for the PORTION OF operations
involving AUTO_INCREMENT:
* If an autoincrement index contains WITHOUT OVERLAPS specification, then
a new value should not be generated, otherwise it should.

Apart from WITHOUT OVERLAPS there is also another notable case, referred
by the reporter - a unique key that has an autoincrement column and a field
from the period specification:
  id int auto_increment, unique(id, s), period for p(s, e)

for this case, no exception is made, and the autoincrementing rules will be
proceeded accordung to the standard (i.e. the value will be advanced on
implicit inserts).

test disabled, until fixed