The C preprocessor symbol WITH_NUMA is never defined. Instead, the symbol
HAVE_LIBNUMA is used for checking if the feature is to be used.

If cmake -DWITH_NUMA=OFF is specified, HAVE_LIBNUMA will not be defined
at compilation time even if the library is available.

If cmake -DWITH_NUMA=ON is specified but the library is not available
at configuration time, the compilation will be aborted.

Problem:- In replication if slave has extra persistent column then these
column are not computed while applying write-set from master.

Solution:- While applying row events from server, we will generate values
for extra persistent columns.

Deprecate the variable in MariaDB 10.2, saying
that it will be removed in 10.3.

The InnoDB source code contains quite a few references to a closed-source
hot backup tool which was originally called InnoDB Hot Backup (ibbackup)
and later incorporated in MySQL Enterprise Backup.

The open source backup tool XtraBackup uses the full database for recovery.
So, the references to UNIV_HOTBACKUP are only cluttering the source code.

The configuration parameter innodb_use_fallocate, which is mapped to
the variable srv_use_posix_fallocate, has no effect in MariaDB 10.2.2
or MariaDB 10.2.3.
Thus the configuration parameter and the variable should be removed.

fil_space_t::recv_size: New member: recovered tablespace size in pages;
0 if no size change was read from the redo log,
or if the size change was implemented.

fil_space_set_recv_size(): New function for setting space->recv_size.

innodb_data_file_size_debug: A debug parameter for setting the system
tablespace size in recovery even when the redo log does not contain
any size changes. It is hard to write a small test case that would
cause the system tablespace to be extended at the critical moment.

recv_parse_log_rec(): Note those tablespaces whose size is being changed
by the redo log, by invoking fil_space_set_recv_size().

innobase_init(): Correct an error message, and do not require a larger
innodb_buffer_pool_size when starting up with a smaller innodb_page_size.

innobase_start_or_create_for_mysql(): Allow startup with any initial
size of the ibdata1 file if the autoextend attribute is set. Require
the minimum size of fixed-size system tablespaces to be 640 pages,
not 10 megabytes. Implement innodb_data_file_size_debug.

open_or_create_data_files(): Round the system tablespace size down
to pages, not to full megabytes, (Our test truncates the system
tablespace to more than 800 pages with innodb_page_size=4k.
InnoDB should not imagine that it was truncated to 768 pages
and then overwrite good pages in the tablespace.)

fil_flush_low(): Refactored from fil_flush().

fil_space_extend_must_retry(): Refactored from
fil_extend_space_to_desired_size().

fil_mutex_enter_and_prepare_for_io(): Extend the tablespace if
fil_space_set_recv_size() was called.

The test case has been successfully run with all the
innodb_page_size values 4k, 8k, 16k, 32k, 64k.

fsp_header_get_crypt_offset(): Remove.

xdes_arr_size(): Remove.

fsp_header_get_encryption_offset(): Make this an inline function.

The correctness of this change was ensured with the following patch
that ensures that the two functions returned the same value, only
differing by FSP_HEADER_OFFSET (38 bytes):

diff --git a/storage/innobase/fsp/fsp0fsp.cc b/storage/innobase/fsp/fsp0fsp.cc
index f2a4c6bf218..e96c788b7df 100644
--- a/storage/innobase/fsp/fsp0fsp.cc
+++ b/storage/innobase/fsp/fsp0fsp.cc
@@ -850,6 +850,7 @@ fsp_parse_init_file_page(
 	return(ptr);
 }

+static ulint fsp_header_get_encryption_offset(const page_size_t&);
 /**********************************************************************//**
 Initializes the fsp system. */
 void
@@ -868,6 +869,31 @@ fsp_init(void)
 #endif

 	/* Does nothing at the moment */
+
+	for (ulint sz = 4096; sz <= 65536; sz *= 2) {
+		ulint m;
+		if (sz <= 16384) {
+			for (ulint ph = 1024; ph <= sz; ph *= 2) {
+				const page_size_t ps(ph, sz, true);
+				ulint maria = fsp_header_get_crypt_offset(ps, &m),
+					oracle = fsp_header_get_encryption_offset(ps);
+				if (maria != oracle + 38) {
+					ib::error() << "zip size mismatch: "
+						    << maria << "!=" << oracle
+						    << "(" << ph <<","<<sz<<")"
+						    << m;
+				}
+			}
+		}
+		const page_size_t p(sz, sz, false);
+		ulint maria = fsp_header_get_crypt_offset(p, &m),
+			oracle = fsp_header_get_encryption_offset(p);
+		if (maria != oracle + 38) {
+			ib::error() << "size mismatch: "
+				    << maria << "!=" << oracle
+				    << "(" <<sz<<")" << m;
+		}
+	}
 }

 /**********************************************************************//**

* some of these tests run just fine with InnoDB:
   -> s/have_xtradb/have_innodb/
* sys_var tests did basic tests for xtradb only variables
   -> remove them, they're useless anyway (sysvar_innodb does it better)
* multi_update had innodb specific tests
   -> move to multi_update_innodb.test

Allocate password hash in statment memory

Allocate password hash in statment memory

MDEV-11656: 'Data structure corruption' IMPORT TABLESPACE doesn't work for encrypted InnoDB tables if space_id changed

Problem was that for encryption we use temporary scratch area for
reading and writing tablespace pages. But if page was not really
decrypted the correct updated page was not moved to scratch area
that was then written. This can happen e.g. for page 0 as it is
newer encrypted even if encryption is enabled and as we write
the contents of old page 0 to tablespace it contained naturally
incorrect space_id that is then later noted and error message
was written. Updated page with correct space_id was lost.

If tablespace is encrypted we use additional
temporary scratch area where pages are read
for decrypting readptr == crypt_io_buffer != io_buffer.

Destination for decryption is a buffer pool block
block->frame == dst == io_buffer that is updated.
Pages that did not require decryption even when
tablespace is marked as encrypted are not copied
instead block->frame is set to src == readptr.

If tablespace was encrypted we copy updated page to
writeptr != io_buffer. This fixes above bug.

For encryption we again use temporary scratch area
writeptr != io_buffer == dst
that is then written to the tablespace

(1) For normal tables src == dst ==  writeptr
ut_ad(!encrypted && !page_compressed ?
	src == dst && dst == writeptr + (i * size):1);
(2) For page compressed tables src == dst == writeptr
ut_ad(page_compressed && !encrypted ?
	src == dst && dst == writeptr + (i * size):1);
(3) For encrypted tables src != dst != writeptr
ut_ad(encrypted ?
	src != dst && dst != writeptr + (i * size):1);

Replace all exit() calls in InnoDB with abort() [possibly via ut_a()].
Calling exit() in a multi-threaded program is problematic also for
the reason that other threads could see corrupted data structures
while some data structures are being cleaned up by atexit() handlers
or similar.

In the long term, all these calls should be replaced with something
that returns an error all the way up the call stack.

MTR raises default wait_for_pos_timeout from 300 to 1500 when tests
are run with valgrind. The same needs to be done for other
replication-related waits

        Item_func_json_length fixed.

        Array counter didn't increment after an item was found.

fil_tablespace_iterate(): Call fil_space_destroy_crypt_data() to
invoke mutex_free() for the mutex_create() that was done in
fil_space_read_crypt_data(). Also, remember to free
iter.crypt_io_buffer.

The failure to call mutex_free() would cause sync_latch_meta_destroy()
to access freed memory on shutdown. This affected the IMPORT of
encrypted tablespaces.

Copy and adapt the test from MySQL 5.7.17.

fil_space_crypt_cleanup(): Call mutex_free() to pair with
fil_space_crypt_init().

fil_space_destroy_crypt_data(): Call mutex_free() to pair with
fil_space_create_crypt_data() and fil_space_read_crypt_data().

fil_crypt_threads_cleanup(): Call mutex_free() to pair with
fil_crypt_threads_init().

fil_space_free_low(): Invoke fil_space_destroy_crypt_data().

fil_close(): Invoke fil_space_crypt_cleanup(), just like
fil_init() invoked fil_space_crypt_init().

Datafile::shutdown(): Set m_crypt_info=NULL without dereferencing
the pointer. The object will be freed along with the fil_space_t
in fil_space_free_low().
Remove some unnecessary conditions (ut_free(NULL) is OK).

srv_shutdown_all_bg_threads(): Shut down the encryption threads
by calling fil_crypt_threads_end().

srv_shutdown_bg_undo_sources(): Do not prematurely call
fil_crypt_threads_end(). Many pages can still be written by
change buffer merge, rollback of incomplete transactions, and
purge, especially in slow shutdown (innodb_fast_shutdown=0).

innobase_shutdown_for_mysql(): Call fil_crypt_threads_cleanup()
also when innodb_read_only=1, because the threads will have been
created also in that case.

sync_check_close(): Re-enable the invocation of sync_latch_meta_destroy()
to free the mutex list.

Make some global fil_crypt_ variables static.

fil_close(): Call mutex_free(&fil_system->mutex) also in InnoDB, not
only in XtraDB. In InnoDB, sync_close() was called before fil_close().

innobase_shutdown_for_mysql(): Call fil_close() before sync_close(),
similar to XtraDB shutdown.

fil_space_crypt_cleanup(): Call mutex_free() to pair with
fil_space_crypt_init().

fil_crypt_threads_cleanup(): Call mutex_free() to pair with
fil_crypt_threads_init().

Try to stabilize test cases. These test behave badly when run in certain order.

Merged fix for innodb_mysql from 5.7.

The reason was that the test was reusing the same log file without deleting it between tests.
Fixed by creating a new log file as part of the test

Implementation of MDEV-7660 introduced unwanted incompatible change:
modifications under LOCK TABLES with autocommit enabled are rolled back on
disconnect. Previously everything was committed, because LOCK TABLES didn't
adjust autocommit setting.

This patch restores original behavior by reverting some changes done in
MDEV-7660:
- sql/sql_parse.cc: do not reset autocommit on LOCK TABLES
- sql/sql_base.cc: do not set autocommit on UNLOCK TABLES
- test cases: main.lock_tables_lost_commit, main.partition_explicit_prune,
  rpl.rpl_switch_stm_row_mixed, tokudb.nested_txn_implicit_commit,
  tokudb_bugs.db806

But it makes InnoDB tables under LOCK TABLES ... READ [LOCAL] not protected
against DML. To restore protection some changes from WL#6671 were merged,
specifically MDL_SHARED_READ_ONLY and test cases.

WL#6671 merge highlights:
- Not all tests merged.
- In MySQL LOCK TABLES ... READ acquires MDL_SHARED_READ_ONLY for all engines,
  in MariaDB MDL_SHARED_READ is always acquired first and then upgraded to
  MDL_SHARED_READ_ONLY for InnoDB only.
- The above allows us to omit MDL_SHARED_WRITE_LOW_PRIO implementation in
  MariaDB, which is rather useless with InnoDB. In MySQL it is needed to
  preserve locking behavior between low priority writes and LOCK TABLES ... READ
  for non-InnoDB engines (covered by sys_vars.sql_low_priority_updates_func).
- Omitted HA_NO_READ_LOCAL_LOCK, we rely on lock_count() instead.
- Omitted "piglets": in MariaDB stream of DML against InnoDB table may lead to
  concurrent LOCK TABLES ... READ starvation.
- HANDLER ... OPEN acquires MDL_SHARED_READ instead of MDL_SHARED in MariaDB.
- Omitted SNRW->X MDL lock upgrade for IMPORT/DISCARD TABLESPAECE under LOCK
  TABLES.
- Omitted strong locks for views, triggers and SP under LOCK TABLES.
- Omitted IX schema lock for LOCK TABLES READ.
- Omitted deadlock weight juggling for LOCK TABLES.

Full WL#6671 merge status:
- innodb.innodb-lock: fully merged
- main.alter_table: not merged due to different HANDLER solution
- main.debug_sync: fully merged
- main.handler_innodb: not merged due to different HANDLER solution
- main.handler_myisam: not merged due to different HANDLER solution
- main.innodb_mysql_lock: fully merged
- main.insert_notembedded: fully merged
- main.lock: not merged (due to no strong locks for views)
- main.lock_multi: not merged
- main.lock_sync: fully merged (partially in MDEV-7660)
- main.mdl_sync: not merged
- main.partition_debug_sync: not merged due to different HANDLER solution
- main.status: fully merged
- main.view: fully merged
- perfschema.mdl_func: not merged (no such test in MariaDB)
- perfschema.table_aggregate_global_2u_2t: not merged (didn't fail in MariaDB)
- perfschema.table_aggregate_global_2u_3t: not merged (didn't fail in MariaDB)
- perfschema.table_aggregate_global_4u_2t: not merged (didn't fail in MariaDB)
- perfschema.table_aggregate_global_4u_3t: not merged (didn't fail in MariaDB)
- perfschema.table_aggregate_hist_2u_2t: not merged (didn't fail in MariaDB)
- perfschema.table_aggregate_hist_2u_3t: not merged (didn't fail in MariaDB)
- perfschema.table_aggregate_hist_4u_2t: not merged (didn't fail in MariaDB)
- perfschema.table_aggregate_hist_4u_3t: not merged (didn't fail in MariaDB)
- perfschema.table_aggregate_thread_2u_2t: not merged (didn't fail in MariaDB)
- perfschema.table_aggregate_thread_2u_3t: not merged (didn't fail in MariaDB)
- perfschema.table_aggregate_thread_4u_2t: not merged (didn't fail in MariaDB)
- perfschema.table_aggregate_thread_4u_3t: not merged (didn't fail in MariaDB)
- perfschema.table_lock_aggregate_global_2u_2t: not merged (didn't fail in MariaDB)
- perfschema.table_lock_aggregate_global_2u_3t: not merged (didn't fail in MariaDB)
- perfschema.table_lock_aggregate_global_4u_2t: not merged (didn't fail in MariaDB)
- perfschema.table_lock_aggregate_global_4u_3t: not merged (didn't fail in MariaDB)
- perfschema.table_lock_aggregate_hist_2u_2t: not merged (didn't fail in MariaDB)
- perfschema.table_lock_aggregate_hist_2u_3t: not merged (didn't fail in MariaDB)
- perfschema.table_lock_aggregate_hist_4u_2t: not merged (didn't fail in MariaDB)
- perfschema.table_lock_aggregate_hist_4u_3t: not merged (didn't fail in MariaDB)
- perfschema.table_lock_aggregate_thread_2u_2t: not merged (didn't fail in MariaDB)
- perfschema.table_lock_aggregate_thread_2u_3t: not merged (didn't fail in MariaDB)
- perfschema.table_lock_aggregate_thread_4u_2t: not merged (didn't fail in MariaDB)
- perfschema.table_lock_aggregate_thread_4u_3t: not merged (didn't fail in MariaDB)
- sys_vars.sql_low_priority_updates_func: not merged
- include/thr_rwlock.h: not merged, rw_pr_lock_assert_write_owner and
  rw_pr_lock_assert_not_write_owner are macros in MariaDB
- sql/handler.h: not merged (HA_NO_READ_LOCAL_LOCK)
- sql/mdl.cc: partially merged (MDL_SHARED_READ_ONLY only)
- sql/mdl.h: partially merged (MDL_SHARED_READ_ONLY only)
- sql/lock.cc: fully merged
- sql/sp_head.cc: not merged
- sql/sp_head.h: not merged
- sql/sql_base.cc: partially merged (MDL_SHARED_READ_ONLY only)
- sql/sql_base.h: not merged
- sql/sql_class.cc: fully merged
- sql/sql_class.h: fully merged
- sql/sql_handler.cc: merged partially (different solution in MariaDB)
- sql/sql_parse.cc: partially merged, mostly omitted low priority write part
- sql/sql_reload.cc: not merged comment change
- sql/sql_table.cc: not merged SNRW->X upgrade for IMPORT/DISCARD TABLESPACE
- sql/sql_view.cc: not merged
- sql/sql_yacc.yy: not merged (MDL_SHARED_WRITE_LOW_PRIO, MDL_SHARED_READ_ONLY)
- sql/table.cc: not merged (MDL_SHARED_WRITE_LOW_PRIO)
- sql/table.h: not merged (MDL_SHARED_WRITE_LOW_PRIO)
- sql/trigger.cc: not merged
- storage/innobase/handler/ha_innodb.cc: merged store_lock()/lock_count()
  changes (in MDEV-7660), didn't merge HA_NO_READ_LOCAL_LOCK
- storage/innobase/handler/ha_innodb.h: fully merged in MDEV-7660
- storage/myisammrg/ha_myisammrg.cc: not merged comment change
- storage/perfschema/table_helper.cc: not merged (no MDL support in MariaDB PFS)
- unittest/gunit/mdl-t.cc: not merged
- unittest/gunit/mdl_sync-t.cc: not merged

MariaDB specific changes:
- handler.heap: different HANDLER solution, MDEV-7660
- handler.innodb: different HANDLER solution, MDEV-7660
- handler.interface: different HANDLER solution, MDEV-7660
- handler.myisam: different HANDLER solution, MDEV-7660
- main.mdl_sync: MDEV-7660 specific changes
- main.partition_debug_sync: removed test due to different HANDLER solution,
  MDEV-7660
- main.truncate_coverage: removed test due to different HANDLER solution,
  MDEV-7660
- mysql-test/include/mtr_warnings.sql: additional cleanup, MDEV-7660
- mysql-test/lib/v1/mtr_report.pl: additional cleanup, MDEV-7660
- plugin/metadata_lock_info/metadata_lock_info.cc: not in MySQL
- sql/sql_handler.cc: MariaDB specific fix for mysql_ha_read(), MDEV-7660