Signed-off-by: Daniel Black <daniel.black@au.ibm.com>

Use my_atomic for updating os_thread_count.

os_thread_init(): Remove.

InnoDB never supported more than one copy of a redo log.
There were provisions to do that. For Mariabackup, let us clean up
this code.

log_sys_init(): Renamed from log_init().

log_set_capacity(): Renamed from log_calc_max_ages().

log_init(): Renamed from log_group_init(). Remove the parameters
id, space_id. Let the caller invoke log_set_capacity() when needed.

log_group_t: Remove id, space_id, log_groups.

log_t: Replace log_groups with a single log.

recv_find_max_checkpoint(): Declare globally. Remove the first parameter.

xtrabackup_choose_lsn_offset(): Remove (dead code).

MySQL WL#6835 replaced the function lock_rec_enqueue_waiting()
with RecLock::enqueue() and later RecLock::add_to_waitq().

Additionally internal check was failing because the test did not
restore a global value properly

MDEV-12924: re-add numa to innodb

Commit 3a3b3d8b overly purged the numa checks.

Re-add this.
Signed-off-by: Daniel Black <daniel.black@au.ibm.com>

When MySQL 5.7 introduced fulltext parser plugins to InnoDB,
it hard-coded the plugin name "ngram" to mean something special.
Because -fsanitize=undefined was issuing warnings for the
assignment in row_merge_create_index() that the value is out of
range for Boolean, we remove this code that was not intended to
be used in MariaDB 10.2.

fts_check_token(): Remove the special logic for N-gram tokens.

Remove a bogus reference to gb18030_chinese_ci, which was introduced
in MySQL 5.7. It is roughly equivalent to utf8mb4_unicode_ci, just
using a different internal encoding, and different collation.

Avoid the redundant output from ut_dbg_assertion_failed by directly
invoking abort().

ut_allocator: Move m_oom_fatal into a template parameter oom_fatal,
to reduce the data and code size.

MDEV-12926 encryption.innodb_onlinealter_encryption, encryption.innodb-bad-key-change failed in buildbot with valgrind

row_merge_write(): Pass the correct (possibly encrypted) buffer
to os_file_write_int_fd().

This bug was introduced in commit 65e1399e
which included a commit to merge changes from MySQL 5.6.36 to
MariaDB Server 10.0.

btr_defragment_thread(): Create the thread in the same place as other
threads. Do not invoke btr_defragment_shutdown(), because
row_drop_tables_for_mysql_in_background() in the master thread can still
keep invoking btr_defragment_remove_table().

logs_empty_and_mark_files_at_shutdown(): Wait for btr_defragment_thread()
to exit.

innobase_start_or_create_for_mysql(), innobase_shutdown_for_mysql():
Skip encryption and scrubbing in innodb_read_only_mode.

srv_export_innodb_status(): Do not export encryption or scrubbing
statistics in innodb_read_only mode, because the threads will not
be running.

InnoDB shutdown assumes that once the server has entered
SRV_SHUTDOWN_FLUSH_PHASE, no change to persistent data is allowed.
It was possible for the master thread to wake up while shutdown
is executing in SRV_SHUTDOWN_FLUSH_PHASE or
even in SRV_SHUTDOWN_LAST_PHASE.

We do not yet know if further crashes at shutdown are possible.
Also, we do not know if all the observed crashes could be explained
by the race conditions that we are now fixing.

srv_shutdown_print_master_pending(): Remove a redundant ut_time() call.

srv_shutdown(): Renamed from srv_master_do_shutdown_tasks().

srv_master_thread(): Do not resume after shutdown has been initiated.

Don't rebuild the table for ALTER TABLE delay_key_write changes.

After that, delay_key_write value in .frm may differ from the
value in .MYI. We'll do what .frm says.

Test fails, because of a bug: global delay_key_write is
cached in the THD and the cached value becomes out-of-date
when the global value changes.

This is fixed in MDEV-11335

cast pointer(64)->long(32)

Make `mysqladmin --local` use `FLUSH LOCAL` for all flush-* commands,
and only do `SET SQL_LOG_BIN=OFF` for create/drop/old_password/password.

Additionally, --local is ignored for all commands that never write
to binlog, so e.g. `mysqladmin --local version` no longer needs SUPER

MDEV-11650 plugins.cracklib_password_check, plugins.two_password_validations fail in buildbot with valgrind (Conditional jump or move depends on uninitialised value)

FederatedX wasn't discovering prefix keys correctly.
Of course, as it had the HA_NO_PREFIX_CHAR_KEYS table_flag set...

fixed valgrind warning in a debug output

Before MDEV-6812, it did not matter that merge_files[].offset was
uninitialized when no files were created.

This problem was introduced in MDEV-6812. There could be a user-visible
impact that the progress reports spit into the error log are bogus.

row_merge_build_indexes(): Initialize merge_files[i].offset.