MDEV-33858 Assertion `(mem_root->flags & 4) == 0' fails on 2nd execution of PS with -DWITH_PROTECT_STATEMENT_MEMROOT=ON

Simply adding tests as the bug is fixed with a backport of MDEV-34447

The memory leak happened on second execution of a prepared statement
that runs UPDATE statement with correlated subquery in right hand side of
the SET clause. In this case, invocation of the method
  table->stat_records()
could return the zero value that results in going into the 'if' branch
that handles impossible where condition. The issue is that this condition
branch missed saving of leaf tables that has to be performed as first
condition optimization activity. Later the PS statement memory root
is marked as read only on finishing first time execution of the prepared
statement. Next time the same statement is executed it hits the assertion
on attempt to allocate a memory on the PS memory root marked as read only.
This memory allocation takes place by the sequence of the following
invocations:
 Prepared_statement::execute
  mysql_execute_command
   Sql_cmd_dml::execute
    Sql_cmd_update::execute_inner
     Sql_cmd_update::update_single_table
      st_select_lex::save_leaf_tables
       List<TABLE_LIST>::push_back

To fix the issue, add the flag SELECT_LEX::leaf_tables_saved to control
whether the method SELECT_LEX::save_leaf_tables() has to be called or
it has been already invoked and no more invocation required.

Similar issue could take place on running the DELETE statement with
the LIMIT clause in PS/SP mode. The reason of memory leak is the same as for
UPDATE case and be fixed in the same way.

From e735cf2ed7cefb2af36f10f3cb47dfc060789df3, the PCRE_INCLUDES
changed to PCRE_INCLUDE_DIRS for consistency.

The columnstore module depends on the old name.

Create a mapping for the columnstore submodule.

10.6+ fix for submodule is:
* https://github.com/mariadb-corporation/mariadb-columnstore-engine/pull/3304

Taking both the FreeBSD[1] and Alpine[1] patch concepts;

provide non-GLIBC definations for HMT_*.

Provide FreeBSD ASM base for __ppc_get_timebase.
On alternately use __builtin_ppc_get_timebase which is described
on https://gcc.gnu.org/onlinedocs/gcc/Basic-PowerPC-Built-in-Functions-Available-on-all-Configurations.html
an not depended on glibc/musl.

[1] https://github.com/freebsd/freebsd-ports/blob/15d22e1c70da81aaa5751ad0d82f92e9451c4d81/databases/mariadb106-server/files/patch-include_my__cpu.h
[2] https://gitlab.alpinelinux.org/alpine/aports/-/blob/master/main/mariadb/ppc-remove-glibc-dep.patch

From https://github.com/freebsd/freebsd-ports/blob/15d22e1c70da81aaa5751ad0d82f92e9451c4d81/databases/mariadb106-server/files/patch-sql_mysqld.cc

Upstream the patch from: https://github.com/freebsd/freebsd-ports/blob/15d22e1c70da81aaa5751ad0d82f92e9451c4d81/databases/mariadb106-server/files/patch-mysys_crc32_crc32c.cc

even if pkg-config has it. otherwise build dependencies
aren't detected.

use pkg-config to find pcre2, if possible

rename PCRE_INCLUDES to use PKG_CHECK_MODULES naming, PCRE_INCLUDE_DIRS

Without the call to my_mutex_init, the mutex attributes
my_fast_mutexattr and my_errorcheck_mutexattr are uninitialized.

Linux tolerates this but FreeBSD doesn't (and segfaults).

We fix for all since the unit text should be testing the
standard mutexes of the system.

clang doesn't have /usr/local/lib in the path. As such
there are various depedency linkages that will fail.

For example pcre and libfmt.`

MySQL-Connector-Net casts SEQ_IN_INDEX to uint and will
raise an exception if the type is a System.Int64.

As we don't support a huge number of multi-columns in
an index reducing to a uint is sufficient to represent
all values and maintain compatibility with MySQL-Connector-Net.

This matches the type (uint) returned by MySQL-8.3 and 8.0.

Reviewer: Alexander Barkov <bar@mariadb.com>

It's possible that MDL conflict handling code is called more
than once for a transaction when:
- it holds more than one conflicting MDL lock
- reschedule_waiters() is executed,
which results in repeated attempts to BF-abort already aborted
transaction.
In such situations, it might be that BF-aborting logic sees
a partially rolled back transaction and erroneously decides
on future actions for such a transaction.

The specific situation tested and fixed is when a SR transaction
applied in the node gets BF-aborted by a started TOI operation.
It's then caught with the server transaction already rolled back,
but with no MDL locks yet released. This caused wrong state
detection for such a transaction during repeated MDL conflict
handling code execution.
Signed-off-by: Julius Goryavsky <julius.goryavsky@mariadb.com>

* Fixes galera.galera_bf_kill_debug test case.
* Enable galera_ssl_upgrade, galera_ssl_reload, galera_pc_bootstrap
* Add MDEV to disabled tests that miss it
Signed-off-by: Julius Goryavsky <julius.goryavsky@mariadb.com>

Based on logs SST was started before donor reached
Primaty state. Add wait_conditions to make sure that
nodes reach Primary state before starting next node.
Signed-off-by: Julius Goryavsky <julius.goryavsky@mariadb.com>

generate consistent error messages,
Signed-off-by: Julius Goryavsky <julius.goryavsky@mariadb.com>

For TOI events specifically we have a situation where in case of the
same error different nodes may generate different messages. This may
be for two reasons:
 - different locale setting between the current client session and
   server default (we can reasonably require server locales to be
   identical on all nodes, but user can change message locale for the
   session)
 - non-deterministic course of STATEMENT execution e.g. for ALTER TABLE

On the other hand we may reasonably expect TOI event failures since
they are executed after replication, so we must ensure that voting is
consistent. For that purpose error codes should be sufficiently unique
and deterministic for TOI event failures as DDLs normally deal with
a single object, so we can merely use MySQL error codes to vote on.

Notice that this problem does not happen with regular transactional
writesets, since the originator node will always vote success and
replica nodes are assumed to have the same global locale setting.
As such different error messages indicate different errors even if
the error code is the same (e.g. ER_DUP_KEY can happen on different
rows tables).

Use only MySQL error code (without the error message) for error voting
in case of TOI event failure.
Signed-off-by: Julius Goryavsky <julius.goryavsky@mariadb.com>

error condition (SST failure), so it should set error code before
exiting.
Signed-off-by: Julius Goryavsky <julius.goryavsky@mariadb.com>

use grep with -a option.
Signed-off-by: Julius Goryavsky <julius.goryavsky@mariadb.com>

When handling fatal signal, shut down Galera networking
before printing out stack trace and writing core file.
This is to achieve fail-silent semantics on crashes which may
keep the process running for a long time, but not fully responding
e.g. due to core dumping or symbol resolving.

Also suppress all Galera/wsrep logging to avoid logging from
background threads to garble crash information from signal handler.

Notice that for fully fail-silent crash, Galera 26.4.19 is needed.
Signed-off-by: Julius Goryavsky <julius.goryavsky@mariadb.com>

This bug was fixed by the patch for bug MDEV-26402.
Only a test case that failed before this patch was applied is added
in this commit.

MDEV-31173 : Server crashes when setting wsrep_cluster_address after adding invalid value to wsrep_allowlist table

Problem was that wsrep_schema tables were not marked as
category information. Fix allows access to wsrep_schema
tables even when node is detached.

This is 10.4-10.9 version of fix.
Signed-off-by: Julius Goryavsky <julius.goryavsky@mariadb.com>

MDEV-33997 : Assertion `((WSREP_PROVIDER_EXISTS_ && this->variables.wsrep_on) && wsrep_emulate_bin_log) || mysql_bin_log.is_open()' failed in int THD::binlog_write_row(TABLE*, bool, const uchar*)

Problem was that we did not found that table was partitioned
and then we should find what is actual underlaying storage
engine.

We should not use RSU for !InnoDB tables.
Signed-off-by: Julius Goryavsky <julius.goryavsky@mariadb.com>

Fix MDEV-34704 typos.

Added missing method of Item_static_float_func

  --quick-max-column-width parameter added to limit field
    width in --quick mode.

recv_recovery_from_checkpoint_start(): Abort startup due to log
corruption if we were unable to parse the entire log between
the latest log checkpoint and the corresponding FILE_CHECKPOINT record.

Also, reduce some code bloat related to log output and log_sys.mutex.

Reviewed by: Debarun Banerjee

Also restored a change that resulted in off-by-one, as well as
appending the correctly indexed key_hint.

The test was expecting the I/O thread to be in a specific state, but thread
scheduling may cause it to not yet have reached that state. So just have a
loop that waits for the expected state to occur.
Signed-off-by: Kristian Nielsen <knielsen@knielsen-hq.org>

Signed-off-by: Kristian Nielsen <knielsen@knielsen-hq.org>

Remove the test for MDEV-14528. This is supposed to test that parallel
replication from pre-10.0 master will update Seconds_Behind_Master. But
after MDEV-12179 the SQL thread is blocked from even beginning to fetch
events from the relay log due to FLUSH TABLES WITH READ LOCK, so the test
case is no longer testing what is was intended to. And pre-10.0 versions are
long since out of support, so does not seem worthwhile to try to rewrite the
test to work another way.

The root cause of the test failure is MDEV-34778. Briefly, depending on
exact timing during slave stop, the rli->sql_thread_caught_up flag may end
up with different value. If it ends up as "true", this causes
Seconds_Behind_Master to be 0 during next slave start; and this caused test
case timeout as the test was waiting for Seconds_Behind_Master to become
non-zero.
Signed-off-by: Kristian Nielsen <knielsen@knielsen-hq.org>

Depending on timing, an extra event run could start just when the event
scheduler is shut down and delay running until after the table has been
dropped; this would cause the test to fail with a "table does not exist"
error in the log.
Signed-off-by: Kristian Nielsen <knielsen@knielsen-hq.org>

(Revert a change done by mistake when XtraDB was removed.)
Signed-off-by: Kristian Nielsen <knielsen@knielsen-hq.org>

Before doing mark_start_commit(), check that there is no pending deadlock
kill. If there is a pending kill, we won't commit (we will abort, roll back,
and retry). Then we should not mark the commit as started, since that could
potentially make the following GCO start too early, before we completed the
commit after the retry.

This condition could trigger in some corner cases, where InnoDB would take
temporarily table/row locks that are released again immediately, not held
until the transaction commits. This happens with dict_stats updates and
possibly auto-increment locks.

Such locks can be passed to thd_rpl_deadlock_check() and cause a deadlock
kill to be scheduled in the background. But since the blocking locks are
held only temporarily, they can be released before the background kill
happens. This way, the kill can be delayed until after mark_start_commit()
has been called. Thus we need to check the synchronous indication
rgi->killed_for_retry, not just the asynchroneous thd->killed.
Signed-off-by: Kristian Nielsen <knielsen@knielsen-hq.org>

One cause of the slowdown is because the ftruncate call can be much
slower on some systems.  ftruncate() is called by Aria for internal
temporary tables, tables created by the optimizer, when the upper level
asks Aria to delete the previous result set. This is needed when some
content from previous tables changes.

I have now changed Aria so that for internal temporary tables we don't
call ftruncate() anymore for maria_delete_all_rows().

I also had to update the Aria repair code to use the logical datafile
size and not the on-disk datafile size, which may contain data from a
previous result set.  The repair code is called to create indexes for
the internal temporary table after it is filled.
I also replaced a call to mysql_file_size() with a pwrite() in
_ma_bitmap_create_first().

Reviewer: Sergei Petrunia <sergey@mariadb.com>
Tester: Dave Gosselin <dave.gosselin@mariadb.com>

removed duplicated methods

Missed method added.

In commit 232d7a5e we almost got
the detection logic right. However, the XGETBV instruction would
crash if Linux was started up with the option noxsave.

have_vpclmulqdq(): Check for the XSAVE flag at the correct position
and also for the AVX flag.

This was tested on Ubuntu 22.04 by starting up its Linux 5.15 kernel
with and without the noxsave option.